Gene : Gorai.011G170100 G. raimondii v2.1
Defline:  (1 of 1) PTHR33428:SF1 - CHLOROPHYLLASE-2, CHLOROPLASTIC Genomic Order:  1701
Name:  ? Gorai.011G170100 Secondary Identifier:  ? PAC:26809680
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5098 Gossypium raimondii pathologic  
Graimondii PWY-6927 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G170100 0.5kb upstream 0.5kb upstream 2626 true Chr11: 37018859-37021484 Gossypium raimondii
Gorai.011G170100 0.5kb upstream 0.5kb upstream 500 false Chr11: 37018859-37019358 Gossypium raimondii
Gorai.011G170100 0.5kb downstream 0.5kb downstream 2626 true Chr11: 37019359-37021984 Gossypium raimondii
Gorai.011G170100 0.5kb downstream 0.5kb downstream 500 false Chr11: 37021485-37021984 Gossypium raimondii
Gorai.011G170100 1.0kb upstream 1.0kb upstream 3126 true Chr11: 37018359-37021484 Gossypium raimondii
Gorai.011G170100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 37018359-37019358 Gossypium raimondii
Gorai.011G170100 1.0kb downstream 1.0kb downstream 3126 true Chr11: 37019359-37022484 Gossypium raimondii
Gorai.011G170100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 37021485-37022484 Gossypium raimondii
Gorai.011G170100 2.0kb upstream 2.0kb upstream 4126 true Chr11: 37017359-37021484 Gossypium raimondii
Gorai.011G170100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 37017359-37019358 Gossypium raimondii
Gorai.011G170100 2.0kb downstream 2.0kb downstream 4126 true Chr11: 37019359-37023484 Gossypium raimondii
Gorai.011G170100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 37021485-37023484 Gossypium raimondii
Gorai.011G170100 5.0kb upstream 5.0kb upstream 7126 true Chr11: 37014359-37021484 Gossypium raimondii
Gorai.011G170100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 37014359-37019358 Gossypium raimondii
Gorai.011G170100 5.0kb downstream 5.0kb downstream 7126 true Chr11: 37019359-37026484 Gossypium raimondii
Gorai.011G170100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 37021485-37026484 Gossypium raimondii
Gorai.011G170100 10.0kb upstream 10.0kb upstream 12126 true Chr11: 37009359-37021484 Gossypium raimondii
Gorai.011G170100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 37009359-37019358 Gossypium raimondii
Gorai.011G170100 10.0kb downstream 10.0kb downstream 12126 true Chr11: 37019359-37031484 Gossypium raimondii
Gorai.011G170100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 37021485-37031484 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830139 5264 Brassicales-Malvales View MSA
124340382 5266 SBM View MSA
124250638 5268 Malvidae View MSA
124065690 5270 Rosid View MSA
123737382 5271 Pentapetalae View MSA
122788570 5272 Eudicot View MSA
122043389 5273 Angiosperm View MSA
121344751 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain