Gene : Gorai.011G133100 G. raimondii v2.1
Defline:  (1 of 13) 2.5.1.29 - Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase Genomic Order:  1331
Name:  ? Gorai.011G133100 Secondary Identifier:  ? PAC:26808172
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5120 Gossypium raimondii pathologic  
Graimondii PWY-5910 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G133100 0.5kb upstream 0.5kb upstream 1863 true Chr11: 20184087-20185949 Gossypium raimondii
Gorai.011G133100 0.5kb upstream 0.5kb upstream 500 false Chr11: 20184087-20184586 Gossypium raimondii
Gorai.011G133100 0.5kb downstream 0.5kb downstream 1863 true Chr11: 20184587-20186449 Gossypium raimondii
Gorai.011G133100 0.5kb downstream 0.5kb downstream 500 false Chr11: 20185950-20186449 Gossypium raimondii
Gorai.011G133100 1.0kb upstream 1.0kb upstream 2363 true Chr11: 20183587-20185949 Gossypium raimondii
Gorai.011G133100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 20183587-20184586 Gossypium raimondii
Gorai.011G133100 1.0kb downstream 1.0kb downstream 2363 true Chr11: 20184587-20186949 Gossypium raimondii
Gorai.011G133100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 20185950-20186949 Gossypium raimondii
Gorai.011G133100 2.0kb upstream 2.0kb upstream 3363 true Chr11: 20182587-20185949 Gossypium raimondii
Gorai.011G133100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 20182587-20184586 Gossypium raimondii
Gorai.011G133100 2.0kb downstream 2.0kb downstream 3363 true Chr11: 20184587-20187949 Gossypium raimondii
Gorai.011G133100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 20185950-20187949 Gossypium raimondii
Gorai.011G133100 5.0kb upstream 5.0kb upstream 6363 true Chr11: 20179587-20185949 Gossypium raimondii
Gorai.011G133100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 20179587-20184586 Gossypium raimondii
Gorai.011G133100 5.0kb downstream 5.0kb downstream 6363 true Chr11: 20184587-20190949 Gossypium raimondii
Gorai.011G133100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 20185950-20190949 Gossypium raimondii
Gorai.011G133100 10.0kb upstream 10.0kb upstream 11363 true Chr11: 20174587-20185949 Gossypium raimondii
Gorai.011G133100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 20174587-20184586 Gossypium raimondii
Gorai.011G133100 10.0kb downstream 10.0kb downstream 11363 true Chr11: 20184587-20195949 Gossypium raimondii
Gorai.011G133100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 20185950-20195949 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836269 5264 Brassicales-Malvales View MSA
124351887 5266 SBM View MSA
124244046 5268 Malvidae View MSA
124051358 5270 Rosid View MSA
123745518 5271 Pentapetalae View MSA
122795597 5272 Eudicot View MSA
122051071 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain