Gene : Gorai.011G147200 G. raimondii v2.1
Defline:  (1 of 5) 2.5.1.85 - All-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) / Solanesyl diphosphate synthase Genomic Order:  1472
Name:  ? Gorai.011G147200 Secondary Identifier:  ? PAC:26810679
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6520 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G147200 0.5kb upstream 0.5kb upstream 917 true Chr11: 23924165-23925081 Gossypium raimondii
Gorai.011G147200 0.5kb upstream 0.5kb upstream 500 false Chr11: 23924165-23924664 Gossypium raimondii
Gorai.011G147200 0.5kb downstream 0.5kb downstream 917 true Chr11: 23924665-23925581 Gossypium raimondii
Gorai.011G147200 0.5kb downstream 0.5kb downstream 500 false Chr11: 23925082-23925581 Gossypium raimondii
Gorai.011G147200 1.0kb upstream 1.0kb upstream 1417 true Chr11: 23923665-23925081 Gossypium raimondii
Gorai.011G147200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 23923665-23924664 Gossypium raimondii
Gorai.011G147200 1.0kb downstream 1.0kb downstream 1417 true Chr11: 23924665-23926081 Gossypium raimondii
Gorai.011G147200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 23925082-23926081 Gossypium raimondii
Gorai.011G147200 2.0kb upstream 2.0kb upstream 2417 true Chr11: 23922665-23925081 Gossypium raimondii
Gorai.011G147200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 23922665-23924664 Gossypium raimondii
Gorai.011G147200 2.0kb downstream 2.0kb downstream 2417 true Chr11: 23924665-23927081 Gossypium raimondii
Gorai.011G147200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 23925082-23927081 Gossypium raimondii
Gorai.011G147200 5.0kb upstream 5.0kb upstream 5417 true Chr11: 23919665-23925081 Gossypium raimondii
Gorai.011G147200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 23919665-23924664 Gossypium raimondii
Gorai.011G147200 5.0kb downstream 5.0kb downstream 5417 true Chr11: 23924665-23930081 Gossypium raimondii
Gorai.011G147200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 23925082-23930081 Gossypium raimondii
Gorai.011G147200 10.0kb upstream 10.0kb upstream 10417 true Chr11: 23914665-23925081 Gossypium raimondii
Gorai.011G147200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 23914665-23924664 Gossypium raimondii
Gorai.011G147200 10.0kb downstream 10.0kb downstream 10417 true Chr11: 23924665-23935081 Gossypium raimondii
Gorai.011G147200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 23925082-23935081 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123812747 5264 Brassicales-Malvales Singleton cluster - no MSA
124309318 5266 SBM Singleton cluster - no MSA
124158972 5268 Malvidae Singleton cluster - no MSA
124074136 5270 Rosid View MSA
123628506 5271 Pentapetalae View MSA
122662777 5272 Eudicot View MSA
122051071 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain