Gene : Gorai.011G164200 G. raimondii v2.1
Defline:  (1 of 2) PTHR23023:SF141 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED Genomic Order:  1642
Name:  ? Gorai.011G164200 Secondary Identifier:  ? PAC:26809028
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWYDQC-4 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G164200 0.5kb upstream 0.5kb upstream 2787 true Chr11: 31513775-31516561 Gossypium raimondii
Gorai.011G164200 0.5kb upstream 0.5kb upstream 500 false Chr11: 31516062-31516561 Gossypium raimondii
Gorai.011G164200 0.5kb downstream 0.5kb downstream 2787 true Chr11: 31513275-31516061 Gossypium raimondii
Gorai.011G164200 0.5kb downstream 0.5kb downstream 500 false Chr11: 31513275-31513774 Gossypium raimondii
Gorai.011G164200 1.0kb upstream 1.0kb upstream 3287 true Chr11: 31513775-31517061 Gossypium raimondii
Gorai.011G164200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31516062-31517061 Gossypium raimondii
Gorai.011G164200 1.0kb downstream 1.0kb downstream 3287 true Chr11: 31512775-31516061 Gossypium raimondii
Gorai.011G164200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31512775-31513774 Gossypium raimondii
Gorai.011G164200 2.0kb upstream 2.0kb upstream 4287 true Chr11: 31513775-31518061 Gossypium raimondii
Gorai.011G164200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31516062-31518061 Gossypium raimondii
Gorai.011G164200 2.0kb downstream 2.0kb downstream 4287 true Chr11: 31511775-31516061 Gossypium raimondii
Gorai.011G164200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31511775-31513774 Gossypium raimondii
Gorai.011G164200 5.0kb upstream 5.0kb upstream 7287 true Chr11: 31513775-31521061 Gossypium raimondii
Gorai.011G164200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31516062-31521061 Gossypium raimondii
Gorai.011G164200 5.0kb downstream 5.0kb downstream 7287 true Chr11: 31508775-31516061 Gossypium raimondii
Gorai.011G164200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31508775-31513774 Gossypium raimondii
Gorai.011G164200 10.0kb upstream 10.0kb upstream 12287 true Chr11: 31513775-31526061 Gossypium raimondii
Gorai.011G164200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31516062-31526061 Gossypium raimondii
Gorai.011G164200 10.0kb downstream 10.0kb downstream 12287 true Chr11: 31503775-31516061 Gossypium raimondii
Gorai.011G164200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31503775-31513774 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827835 5264 Brassicales-Malvales View MSA
124337089 5266 SBM View MSA
124242523 5268 Malvidae View MSA
124073695 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain