Protein Domain : IPR008829

Type:  Family Name:  SepSecS/SepCysS family
Description:  Early annotation suggested this family, SepSecS, of several eukaryotic and archaeal proteins, was involved in antigen-antibodies responses in the liver and pancreas [, ]. Structural studies show that the family is O-phosphoseryl-tRNA(Sec) selenium transferase, an enzyme involved in the synthesis of the amino acid selenocysteine (Sec). Sec is the only amino acid whose biosynthesis occurs on its cognate transfer RNA (tRNA). SepSecS catalyses the final step in the formation of the amino acid [, , , ]. The early observation that autoantibodies isolated from patients with type I autoimmune hepatitis targeted a ribonucleoprotein complex containing tRNASec led to the identification and characterisation of the archaeal and the human SepSecS []. SepSecS forms its own branch in the family of fold-type I pyridoxal phosphate (PLP) enzymes that goes back to the last universal common ancestor.This entry also includes O-phosphoseryl-tRNA:Cys-tRNA synthase SepCysS. It is found in Methanogenic archaea, which have an alternative pathway for Cys-tRNACys formation [, ]. Short Name:  SepSecS/SepCysS

2 Child Features

DB identifier Type Name
IPR019872 Family O-phosphoseryl-tRNA(Sec) selenium transferase
IPR013375 Family O-phosphoseryl-tRNA:Cys-tRNA synthase, archaea

1 Contains

DB identifier Type Name
IPR015421 Domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1

1 Cross References

Identifier
PF05889

0 Found In

1 GO Annotation

GO Term Gene Name
GO:0016740 IPR008829

1 Ontology Annotations

GO Term Gene Name
GO:0016740 IPR008829

0 Parent Features

39 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_123.32 PAC:16407131 Carica papaya 592  
Lus10029579 PAC:23152116 Linum usitatissimum 597  
11877 I0Z793 PAC:27393204 Coccomyxa subellipsoidea C-169 473  
16680 C1MR20 PAC:27346657 Micromonas pusilla CCMP1545 505  
56124 C1DXY7 PAC:27396844 Micromonas sp RCC299 498  
35440 A4S0T6 PAC:27414314 Ostreococcus lucimarinus 481  
Cre12.g547750.t1.2 A0A2K3D6E8 PAC:30793196 Chlamydomonas reinhardtii 595  
Cre02.g105150.t1.1 A0A2K3E2L8 PAC:30785104 Chlamydomonas reinhardtii 714  
Sphfalx0040s0063.1.p PAC:32624067 Sphagnum fallax 558  
Sphfalx0040s0063.3.p PAC:32624069 Sphagnum fallax 558  
Sphfalx0040s0063.2.p PAC:32624068 Sphagnum fallax 558  
Dusal.0566s00002.1.p PAC:33194250 Dunaliella salina 483  
Solyc07g016050.2.1 PAC:36160741 Solanum lycopersicum 345  
Cz10g24090.t1 PAC:38244247 Chromochloris zofingiensis 587  
Bobra.168_1s0042.1.p PAC:40718752 Botryococcus braunii 231  
Bobra.168_1s0041.1.p PAC:40718740 Botryococcus braunii 468  
MgTOL.L1733.2.p PAC:40962312 Mimulus guttatus TOL 392  
MgNONTOL.L1694.1.p PAC:41024953 Mimulus guttatus NONTOL 392  
GlymaLee.12G045600.2.p PAC:41297239 Glycine max Lee 391  
Solyc07g016050.3.1 PAC:41490733 Solanum lycopersicum 342  
Sphmag06G128500.1.p PAC:41919502 Sphagnum magellanicum 713  
Sphfalx06G124300.6.p PAC:41974503 Sphagnum fallax 574  
Sphfalx06G124300.5.p PAC:41974502 Sphagnum fallax 574  
Sphfalx06G124300.1.p PAC:41974501 Sphagnum fallax 666  
Sphfalx06G124300.4.p PAC:41974506 Sphagnum fallax 558  
Sphfalx06G124300.3.p PAC:41974505 Sphagnum fallax 558  
Sphfalx06G124300.2.p PAC:41974504 Sphagnum fallax 558  
Thecc.09G194100.2.p PAC:42011165 Theobroma cacao 392  
CKAN_00293400 A0A3S3M011 PAC:42701954 Cinnamomum kanehirae 556  
EL10Ac2g03632.1 PAC:43408134 Beta vulgaris 498  

8 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10801173
            11481605
            17512006
            18158303
            18093968
            19608919
            17194211
            18559341