Protein Domain : IPR028924

Type:  Domain Name:  Permuted single zf-CXXC unit
Description:  This is a permuted version of a single unit of the zf-CXXC domain that is detected in the Demeter-like proteins and ROS1 (REPRESSOR OF SILENCING 1) from plants []. Demeter and ROS1 proteins catalyse the release of 5-methylcytosine (5-meC) from DNA by a glycosylase/lyase mechanism []. Structural comparisons show that the mono-CXXC is homologous to the structural-zinc binding domain of medium chain dehydrogenases []. The classical zf-CXXC domain binds nonmethyl-CpG dinucleotides. Short Name:  Perm-CXXC
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0 Child Features

0 Contains

1 Cross References

Identifier
PF15629

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_128.52 PAC:16407478 Carica papaya 1889  
29991.m000647 B9SN84 PAC:16815264 Ricinus communis 1712  
29092.m000452 B9SRG6 PAC:16802273 Ricinus communis 1634  
29428.m000327 B9SY20 PAC:16802843 Ricinus communis 1876  
Cucsa.083110.1 PAC:16956375 Cucumis sativus 1352  
Cucsa.308950.1 A0A0A0KTG6 PAC:16976432 Cucumis sativus 1844  
Cucsa.378580.1 PAC:16982072 Cucumis sativus 1776  
orange1.1g002448m A0A067DAC5 PAC:18117679 Citrus sinensis 921  
orange1.1g002604m A0A067DEH5 PAC:18117680 Citrus sinensis 901  
orange1.1g002245m A0A067DAR8 PAC:18117678 Citrus sinensis 947  
orange1.1g002141m PAC:18100991 Citrus sinensis 960  
orange1.1g002607m PAC:18100992 Citrus sinensis 901  
orange1.1g001299m A0A067DR76 PAC:18094521 Citrus sinensis 1105  
orange1.1g000431m A0A067E2L0 PAC:18094520 Citrus sinensis 1515  
orange1.1g000414m A0A067DRL9 PAC:18094519 Citrus sinensis 1541  
AT4G34060.2 B3H5X5 PAC:19646339 Arabidopsis thaliana 957  
AT4G34060.1 O49498 PAC:19646338 Arabidopsis thaliana 1044  
AT5G04560.2 Q8LK56 PAC:19671552 Arabidopsis thaliana 1987  
AT5G04560.1 Q8LK56 PAC:19671553 Arabidopsis thaliana 1729  
AT3G10010.1 Q9SR66 PAC:19658661 Arabidopsis thaliana 1332  
AT2G36490.1 Q9SJQ6 PAC:19641819 Arabidopsis thaliana 1393  
Thhalv10026936m V4MLU1 PAC:20195909 Eutrema salsugineum 1021  
Thhalv10016139m V4M7J3 PAC:20181043 Eutrema salsugineum 1468  
Thhalv10019961m V4LYZ6 PAC:20182272 Eutrema salsugineum 1057  
Ciclev10010895m V4SS36 PAC:20796681 Citrus clementina 1807  
Ciclev10010892m V4S7T4 PAC:20796680 Citrus clementina 1964  
Ciclev10027676m V4SAT0 PAC:20812198 Citrus clementina 1762  
Ciclev10030474m V4VC52 PAC:20802982 Citrus clementina 2029  
Lus10027713 PAC:23156975 Linum usitatissimum 1597  
Lus10014367 PAC:23143692 Linum usitatissimum 1812  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            21507349
            16624880