Protein Domain : IPR002583

Type:  Family Name:  Ribosomal protein S20
Description:  Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ].This family consists of bacterial (and chloroplast) examples of the ribosomal small subunit protein S20. Bacterial ribosomal protein S20 forms part of the 30S ribosomal subunit, and interacts with 16S rRNA. Short Name:  Ribosomal_S20

0 Child Features

0 Contains

6 Cross Referencess

Identifier
PF01649
PD004231
TIGR00029
G3DSA:1.20.58.110
SSF46992
MF_00500

0 Found In

5 GO Annotations

GO Term Gene Name
GO:0003723 IPR002583
GO:0003735 IPR002583
GO:0006412 IPR002583
GO:0005622 IPR002583
GO:0005840 IPR002583

5 Ontology Annotations

GO Term Gene Name
GO:0003723 IPR002583
GO:0003735 IPR002583
GO:0006412 IPR002583
GO:0005622 IPR002583
GO:0005840 IPR002583

0 Parent Features

617 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_131.85 PAC:16408084 Carica papaya 150  
50483.m000020 B9TPV6 PAC:16828272 Ricinus communis 223  
27904.m000207 B9T1X1 PAC:16799455 Ricinus communis 185  
Cucsa.122920.1 A0A0A0KZK9 PAC:16961521 Cucumis sativus 184  
Cucsa.126600.1 PAC:16961948 Cucumis sativus 883  
Cucsa.349540.1 PAC:16979795 Cucumis sativus 381  
orange1.1g029900m A0A067E2G1 PAC:18100947 Citrus sinensis 185  
AT3G15190.1 Q9ASV6 PAC:19663100 Arabidopsis thaliana 202  
Thhalv10021521m V4LX65 PAC:20183964 Eutrema salsugineum 209  
Thhalv10016044m V4N560 PAC:20206240 Eutrema salsugineum 254  
Thhalv10003970m V4L0A9 PAC:20199209 Eutrema salsugineum 533  
Ciclev10009636m V4UL85 PAC:20793290 Citrus clementina 185  
Lus10041925 PAC:23153496 Linum usitatissimum 211  
Lus10005538 PAC:23139638 Linum usitatissimum 192  
Potri.015G117000.1 A0A2K1XLN0 PAC:27017237 Populus trichocarpa 96  
Potri.001G396600.2 PAC:27042122 Populus trichocarpa 209  
Potri.001G396600.1 PAC:27042121 Populus trichocarpa 212  
Gorai.013G169400.1 A0A0D2SFJ3 PAC:26787283 Gossypium raimondii 80  
Gorai.013G169400.2 A0A0D2U2U6 PAC:26787284 Gossypium raimondii 66  
Gorai.009G375600.1 A0A0D2SEX7 PAC:26771393 Gossypium raimondii 188  
Gorai.011G026900.1 A0A0D2T1C5 PAC:26811050 Gossypium raimondii 927  
195286 C1N464 PAC:27348983 Micromonas pusilla CCMP1545 151  
56120 C1DXZ1 PAC:27396406 Micromonas sp RCC299 369  
63880 C1EGI1 PAC:27403692 Micromonas sp RCC299 208  
9610 A4RT68 PAC:27414768 Ostreococcus lucimarinus 84  
Thecc1EG031612t1 A0A061F874 PAC:27445651 Theobroma cacao 193  
Thecc1EG031612t2 A0A061FF41 PAC:27445653 Theobroma cacao 131  
Thecc1EG031612t3 A0A061F6U8 PAC:27445652 Theobroma cacao 186  
Migut.E00479.1.p A0A022QUC7 PAC:28922192 Mimulus guttatus 522  
Migut.H01957.1.p A0A022QGI5 PAC:28953453 Mimulus guttatus 185  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11297922
            11290319
            11114498