Protein Domain : IPR003322

Type:  Domain Name:  Beta-retroviral matrix protein
Description:  Retroviral matrix proteins (or major core proteins) are components of envelope-associated capsids, which line the inner surface of virus envelopes and are associated with viral membranes []. Matrix proteins are produced as part of Gag precursor polyproteins. During viral maturation, the Gag polyprotein is cleaved into major structural proteins by the viral protease, yielding the matrix (MA), capsid (CA), nucleocapsid (NC), and some smaller peptides. Gag-derived proteins govern the entire assembly and release of the virus particles, with matrix proteins playing key roles in Gag stability, capsid assembly, transport and budding. Although matrix proteins from different retroviruses appear to perform similar functions and can have similar structural folds, their primary sequences can be very different.This entry represents matrix proteins from beta-retroviruses such as Mason-Pfizer monkey virus(MPMV) (Simian Mason-Pfizer virus) and Mouse mammary tumor virus(MMTV) [, ]. This entry also identifies matrix proteins from several eukaryotic endogenous retroviruses, which arise when one or more copies of the retroviral genome becomes integrated into the host genome []. Short Name:  B_retro_matrix

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF02337
PD004265

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0005198 IPR003322
GO:0019028 IPR003322

2 Ontology Annotations

GO Term Gene Name
GO:0005198 IPR003322
GO:0019028 IPR003322

1 Parent Features

DB identifier Type Name
IPR010999 Domain Retroviral matrix protein

17 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
Gorai.006G236100.4 A0A0D2S1A6 PAC:26829466 Gossypium raimondii 476  
Gorai.006G236100.2 A0A0D2QFR7 PAC:26829463 Gossypium raimondii 609  
Gorai.006G236100.3 A0A0D2QFR7 PAC:26829464 Gossypium raimondii 609  
Gohir.D09G215600.1.p PAC:38125742 Gossypium hirsutum 609  
Gohir.D09G211200.1.p PAC:38124819 Gossypium hirsutum 609  
Crahi.0727s0014.1.p PAC:39985399 Crambe hispanica 162  
Gomus.D09G241200.1.p A0A5D2TQN1 PAC:42095609 Gossypium mustelinum 609  
Gotom.D09G250100.1.p A0A5D2JMF0 PAC:42233570 Gossypium tomentosum 609  
Gobar.D09G233100.1.p A0A5J5Q8L8 PAC:42309973 Gossypium barbadense 609  
Gohir.D09G215600.2.p PAC:42391090 Gossypium hirsutum 609  
Gohir.D09G215600.1.p PAC:42391089 Gossypium hirsutum 609  
Gohir.A09G213674.1.p PAC:42427033 Gossypium hirsutum 609  
Godar.D09G253300.1.p A0A5D2BCY9 PAC:42528253 Gossypium darwinii 609  
CiLak.05G079300.1.p PAC:44241168 Carya illinoinensis Lakota 443  
CiEll.05G072900.1.p PAC:44294016 Carya illinoinensis Elliott 443  
Gorai.006G236100.1 A0A0D2NXJ4 PAC:26829465 Gossypium raimondii 605  
Gorai.006G236100.1 A0A0D2NXJ4 PAC:26829465 Gossypium raimondii 605  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9657938
            12876457
            15113883
            9499052