Gene : Brdisv1BdTR11A1042420m.g B. distachyon BdTR11a v1
Defline:  (1 of 3) PTHR21225//PTHR21225:SF5 - PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE DAHP SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  2382
Name:  ? Brdisv1BdTR11A1042420m.g Secondary Identifier:  ? PAC:35687893
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BdistachyonBdTR11a ARO-PWY Brachypodium distachyon BdTR11a pathologic  
BdistachyonBdTR11a PWY-6164 Brachypodium distachyon BdTR11a pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brdisv1BdTR11A1042420m.g 0.5kb upstream 0.5kb upstream 3008 true pseudomolecule_7: 17657234-17660241 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 0.5kb upstream 0.5kb upstream 500 false pseudomolecule_7: 17659742-17660241 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 0.5kb downstream 0.5kb downstream 3008 true pseudomolecule_7: 17656734-17659741 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 0.5kb downstream 0.5kb downstream 500 false pseudomolecule_7: 17656734-17657233 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 1.0kb upstream 1.0kb upstream 3508 true pseudomolecule_7: 17657234-17660741 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 1.0kb upstream 1.0kb upstream 1000 false pseudomolecule_7: 17659742-17660741 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 1.0kb downstream 1.0kb downstream 3508 true pseudomolecule_7: 17656234-17659741 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 1.0kb downstream 1.0kb downstream 1000 false pseudomolecule_7: 17656234-17657233 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 2.0kb upstream 2.0kb upstream 4508 true pseudomolecule_7: 17657234-17661741 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 2.0kb upstream 2.0kb upstream 2000 false pseudomolecule_7: 17659742-17661741 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 2.0kb downstream 2.0kb downstream 4508 true pseudomolecule_7: 17655234-17659741 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 2.0kb downstream 2.0kb downstream 2000 false pseudomolecule_7: 17655234-17657233 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 5.0kb upstream 5.0kb upstream 7508 true pseudomolecule_7: 17657234-17664741 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 5.0kb upstream 5.0kb upstream 5000 false pseudomolecule_7: 17659742-17664741 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 5.0kb downstream 5.0kb downstream 7508 true pseudomolecule_7: 17652234-17659741 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 5.0kb downstream 5.0kb downstream 5000 false pseudomolecule_7: 17652234-17657233 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 10.0kb upstream 10.0kb upstream 12508 true pseudomolecule_7: 17657234-17669741 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 10.0kb upstream 10.0kb upstream 10000 false pseudomolecule_7: 17659742-17669741 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 10.0kb downstream 10.0kb downstream 12508 true pseudomolecule_7: 17647234-17659741 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1042420m.g 10.0kb downstream 10.0kb downstream 10000 false pseudomolecule_7: 17647234-17657233 Brachypodium distachyon BdTR11a

1 Protein Family

Cluster ID Method ID Method Name Sequence Alignment
66143368 5043 BrachyPan View MSA

0 Rna Seq Expressions

1 Strain

DB identifier