Gene : Brdisv1BdTR11A1040368m.g B. distachyon BdTR11a v1
Defline:  (1 of 2) PTHR11451:SF3 - PROLINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  463
Name:  ? Brdisv1BdTR11A1040368m.g Secondary Identifier:  ? PAC:35694491
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BdistachyonBdTR11a TRNA-CHARGING-PWY Brachypodium distachyon BdTR11a pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brdisv1BdTR11A1040368m.g 0.5kb upstream 0.5kb upstream 2219 true pseudomolecule_7: 3207867-3210085 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 0.5kb upstream 0.5kb upstream 500 false pseudomolecule_7: 3209586-3210085 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 0.5kb downstream 0.5kb downstream 2219 true pseudomolecule_7: 3207367-3209585 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 0.5kb downstream 0.5kb downstream 500 false pseudomolecule_7: 3207367-3207866 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 1.0kb upstream 1.0kb upstream 2719 true pseudomolecule_7: 3207867-3210585 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 1.0kb upstream 1.0kb upstream 1000 false pseudomolecule_7: 3209586-3210585 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 1.0kb downstream 1.0kb downstream 2719 true pseudomolecule_7: 3206867-3209585 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 1.0kb downstream 1.0kb downstream 1000 false pseudomolecule_7: 3206867-3207866 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 2.0kb upstream 2.0kb upstream 3719 true pseudomolecule_7: 3207867-3211585 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 2.0kb upstream 2.0kb upstream 2000 false pseudomolecule_7: 3209586-3211585 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 2.0kb downstream 2.0kb downstream 3719 true pseudomolecule_7: 3205867-3209585 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 2.0kb downstream 2.0kb downstream 2000 false pseudomolecule_7: 3205867-3207866 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 5.0kb upstream 5.0kb upstream 6719 true pseudomolecule_7: 3207867-3214585 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 5.0kb upstream 5.0kb upstream 5000 false pseudomolecule_7: 3209586-3214585 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 5.0kb downstream 5.0kb downstream 6719 true pseudomolecule_7: 3202867-3209585 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 5.0kb downstream 5.0kb downstream 5000 false pseudomolecule_7: 3202867-3207866 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 10.0kb upstream 10.0kb upstream 11719 true pseudomolecule_7: 3207867-3219585 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 10.0kb upstream 10.0kb upstream 10000 false pseudomolecule_7: 3209586-3219585 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 10.0kb downstream 10.0kb downstream 11719 true pseudomolecule_7: 3197867-3209585 Brachypodium distachyon BdTR11a
Brdisv1BdTR11A1040368m.g 10.0kb downstream 10.0kb downstream 10000 false pseudomolecule_7: 3197867-3207866 Brachypodium distachyon BdTR11a

1 Protein Family

Cluster ID Method ID Method Name Sequence Alignment
66146401 5043 BrachyPan Singleton cluster - no MSA

0 Rna Seq Expressions

1 Strain

DB identifier