Protein Domain : IPR013867

Type:  Domain Name:  Telomere repeat-binding factor, dimerisation domain
Description:  Telomeres function to shield chromosome ends from degradation and end-to-end fusions, as well as preventing the activation of DNA damage checkpoints. Telomeric repeat binding factor (TRF) proteins TRF1 and TRF2 are major components of vertebrate telomeres required for regulation of telomere stability. TRF1 and TRF2 bind to telomeric DNA as homodimers. Dimerisation involves the TRF homology (TRFH) subdomain contained within the dimerisation domain. The TRFH subdomain is important not only for dimerisation, but for DNA binding, telomere localisation, and interactions with other telomeric proteins. The dimerisation domains of TRF1 and TRF2 show the same multi-helical structure, arranged in a solenoid conformation similar to TPR repeats, which can be divided into an alpha-alpha superhelix and a long alpha hairpin [].The two related human TRF proteins hTRF1 and hTRF2 form homodimers and bind directly to telomeric TTAGGG repeats via the myb DNA binding domain at the carboxy terminus []. TRF1 is implicated in telomere length regulation and TRF2 in telomere protection []. Other telomere complex associated proteins are recruited through their interaction with either TRF1 or TRF2. The fission yeast protein Taz1p (telomere-associated in Schizosaccharomyces pombe(Fission yeast) has similarity to both hTRF1 and hTRF2 and may perform the dual functions of TRF1 and TRF2 at fission yeast telomeres []. This entry represents dimerisation domain. Short Name:  Telomere_rpt-bd_fac_dimer_dom

0 Child Features

0 Contains

4 Cross Referencess

Identifier
PF08558
PD014243
G3DSA:1.25.40.210
SSF63600

1 Found In

DB identifier Type Name
IPR017357 Family Telomeric repeat-binding factor 1

2 GO Annotations

GO Term Gene Name
GO:0042162 IPR013867
GO:0042803 IPR013867

2 Ontology Annotations

GO Term Gene Name
GO:0042162 IPR013867
GO:0042803 IPR013867

0 Parent Features

149 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_206.7 PAC:16413278 Carica papaya 39  
Thhalv10024652m V4P3W9 PAC:20193163 Eutrema salsugineum 642  
Ciclev10000157m V4SH99 PAC:20788666 Citrus clementina 982  
Ciclev10000037m V4V535 PAC:20788665 Citrus clementina 1303  
Ciclev10030401m V4RN24 PAC:20813556 Citrus clementina 185  
Lus10031640 PAC:23155922 Linum usitatissimum 212  
Gorai.009G233700.1 A0A0D2TPP0 PAC:26769898 Gossypium raimondii 110  
Araha.28901s0001.1.p PAC:28850748 Arabidopsis halleri 170  
Brara.K00526.1.p A0A397KXP9 PAC:30636104 Brassica rapa FPsc 631  
Medtr4g074320.1 A0A072ULB9 PAC:31112694 Medicago truncatula 188  
Medtr8g447350.1 A0A072TR81 PAC:31074085 Medicago truncatula 184  
Eucgr.I01690.1.p PAC:32064057 Eucalyptus grandis 837  
Prupe.4G000100.3.p A0A251PDG0 PAC:32093965 Prunus persica 592  
Prupe.4G000100.1.p A0A251PDG0 PAC:32093963 Prunus persica 592  
Prupe.4G000100.2.p A0A251PDG0 PAC:32093964 Prunus persica 592  
Kalax.0164s0080.1.p PAC:32532022 Kalanchoe laxiflora 543  
Kalax.0072s0094.1.p PAC:32569063 Kalanchoe laxiflora 541  
Pp3c1_9440V3.2.p A0A2K1L7L1 PAC:32967154 Physcomitrium patens 488  
Pp3c1_9440V3.1.p A0A2K1L7L1 PAC:32967153 Physcomitrium patens 488  
ChrSy.fgenesh.mRNA.15 PAC:33149889 Oryza sativa 170  
Zosma195g00300.1 A0A0K9PP58 PAC:33169447 Zostera marina 197  
Kaladp0351s0013.1.p PAC:35753184 Kalanchoe fedtschenkoi 540  
AL1G30600.t1 PAC:35933822 Arabidopsis lyrata 167  
AUR62024237-RA PAC:36281049 Chenopodium quinoa 143  
AUR62005503-RA PAC:36319767 Chenopodium quinoa 105  
AUR62030723-RA PAC:36290954 Chenopodium quinoa 400  
Bol011782 PAC:37359340 Brassica oleracea capitata 72  
PGSC0003DMP400041088 PAC:37439647 Solanum tuberosum 122  
Anaoc.0007s1185.1.p PAC:37508762 Anacardium occidentale 497  
Oeu027896.1 PAC:37699030 Olea europaea 658  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11545737
            15316005
            9034194