Protein Domain : IPR006194

Type:  Family Name:  Glycine-tRNA synthetase, heterodimeric
Description:  The aminoacyl-tRNA synthetase (also known as aminoacyl-tRNA ligase) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c.Glycyl-tRNA synthetase exhibits different oligomeric structures in different organisms (alpha 2 beta 2 and alpha 2) []. This entry represents the alpha and beta subunits of heterodimeric glycine-tRNA synthetases. Short Name:  Gly-tRNA-synth_heterodimer

2 Child Features

DB identifier Type Name
IPR002310 Family Glycine-tRNA ligase, alpha subunit
IPR015944 Family Glycine-tRNA ligase, beta subunit

0 Contains

1 Cross References

Identifier
PS50861

0 Found In

5 GO Annotations

GO Term Gene Name
GO:0000166 IPR006194
GO:0004820 IPR006194
GO:0005524 IPR006194
GO:0006426 IPR006194
GO:0005737 IPR006194

5 Ontology Annotations

GO Term Gene Name
GO:0000166 IPR006194
GO:0004820 IPR006194
GO:0005524 IPR006194
GO:0006426 IPR006194
GO:0005737 IPR006194

0 Parent Features

662 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_22.52 PAC:16413892 Carica papaya 385  
evm.model.supercontig_22.56 PAC:16413896 Carica papaya 576  
30174.m008746 B9RCZ0 PAC:16822391 Ricinus communis 1069  
Cucsa.121010.1 PAC:16961246 Cucumis sativus 1068  
orange1.1g001359m A0A067HCB2 PAC:18136404 Citrus sinensis 1092  
orange1.1g001485m A0A067H0H2 PAC:18136405 Citrus sinensis 1070  
orange1.1g002254m A0A067H0W1 PAC:18136406 Citrus sinensis 947  
AT3G48110.1 Q8L785 PAC:19664855 Arabidopsis thaliana 1067  
Thhalv10018047m V4K9C1 PAC:20191968 Eutrema salsugineum 1064  
Thhalv10018048m V4KK42 PAC:20191969 Eutrema salsugineum 1063  
Ciclev10018701m PAC:20808839 Citrus clementina 979  
Lus10028211 PAC:23166449 Linum usitatissimum 1079  
Lus10042915 PAC:23182037 Linum usitatissimum 999  
Potri.014G049200.4 PAC:27033073 Populus trichocarpa 512  
Potri.014G049200.2 A0A2K1XQL9 PAC:27033071 Populus trichocarpa 734  
Potri.014G049200.1 B9I906 PAC:27033070 Populus trichocarpa 1078  
Potri.014G048500.1 A0A2K1XQL1 PAC:27035177 Populus trichocarpa 961  
Potri.014G049200.3 PAC:27033072 Populus trichocarpa 540  
Gorai.004G038800.1 A0A0D2P6D5 PAC:26772111 Gossypium raimondii 1072  
53607 I0YW52 PAC:27388733 Coccomyxa subellipsoidea C-169 1063  
171168 C1MYQ9 PAC:27339150 Micromonas pusilla CCMP1545 963  
86357 C1EEL4 PAC:27405330 Micromonas sp RCC299 1045  
29834 A4RTK9 PAC:27414795 Ostreococcus lucimarinus 1051  
Thecc1EG005719t1 A0A061E2H3 PAC:27434251 Theobroma cacao 1071  
Migut.B01531.1.p PAC:28947434 Mimulus guttatus 1075  
Araha.11126s0012.1.p PAC:28842091 Arabidopsis halleri 986  
Araha.11756s0353.1.p PAC:28856675 Arabidopsis halleri 948  
Cagra.4239s0008.1.p PAC:28913041 Capsella grandiflora 1068  
Glyma.03G110500.1.p A0A368UIE1 PAC:30516389 Glycine max 1099  
Glyma.03G110500.4.p A0A0R0KRN2 PAC:30516392 Glycine max 736  

7 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8364025
            8274143
            1852601
            2053131
            10673435
            2203971
            8839980