Protein Domain : IPR011425

Type:  Family Name:  Mediator complex, subunit Med9
Description:  The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP.This entry represents subunit Med9 of the Mediator complex. Subunit Med9 is part of the middle module of the Mediator complex []; this associates with the core polymerase subunits to form the RNA polymerase II holoenzyme.Med9 alternatively known as the chromosome segregation protein, CSE2 () is required, along with CSE1 () for accurate mitotic chromosome segregation in Saccharomyces cerevisiae(Baker's yeast) []. Short Name:  Mediator_Med9

0 Child Features

0 Contains

1 Cross References

Identifier
PF07544

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0001104 IPR011425
GO:0006357 IPR011425
GO:0016592 IPR011425

3 Ontology Annotations

GO Term Gene Name
GO:0001104 IPR011425
GO:0006357 IPR011425
GO:0016592 IPR011425

0 Parent Features

134 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_25.42 PAC:16414836 Carica papaya 178  
Cucsa.341160.1 PAC:16979186 Cucumis sativus 259  
Lus10003788 PAC:23162678 Linum usitatissimum 93  
Gorai.009G141600.1 A0A0D2QFR4 PAC:26770154 Gossypium raimondii 174  
Migut.I01030.2.p PAC:28930703 Mimulus guttatus 166  
Migut.I01030.1.p PAC:28930704 Mimulus guttatus 166  
Spipo0G0043000 PAC:31508695 Spirodela polyrhiza 189  
evm_27.model.AmTr_v1.0_scaffold00001.46 W1NLQ0 PAC:31550948 Amborella trichopoda 127  
Prupe.3G049000.1.p A0A251PVF0 PAC:32108878 Prunus persica 183  
Bradi2g13760.2.p A0A0Q3FYI0 PAC:32777517 Brachypodium distachyon 146  
Pp3c21_4920V3.1.p A9RTC0 PAC:32914389 Physcomitrium patens 113  
Pp3c21_4920V3.3.p A9RTC0 PAC:32914391 Physcomitrium patens 113  
Pp3c21_4920V3.4.p A9RTC0 PAC:32914392 Physcomitrium patens 113  
Pp3c21_4920V3.2.p A9RTC0 PAC:32914390 Physcomitrium patens 113  
Aco020825.1 PAC:33034942 Ananas comosus 228  
Aqcoe5G036100.1.p A0A2G5DNZ9 PAC:33090161 Aquilegia coerulea 166  
Aqcoe5G036100.5.p A0A2G5DNZ9 PAC:33090163 Aquilegia coerulea 166  
Aqcoe5G036100.2.p A0A2G5DNZ9 PAC:33090162 Aquilegia coerulea 166  
Brdisv1Per11015697m.p A0A0Q3FYI0 PAC:33224034 Brachypodium distachyon Per1 146  
Brdisv1Uni21014804m.p A0A0Q3FYI0 PAC:33276945 Brachypodium distachyon Uni2 146  
Brdisv1Bd3-1_r1012112m.p PAC:33315820 Brachypodium distachyon Bd3-1 146  
Brdisv1Bd3-1_r1012113m.p PAC:33315819 Brachypodium distachyon Bd3-1 146  
Brdisv1BdTR7a1015566m.p A0A0Q3FYI0 PAC:33358946 Brachypodium distachyon BdTR7a 146  
Brdisv1Koz-11015688m.p A0A0Q3FYI0 PAC:33406157 Brachypodium distachyon Koz-1 146  
Brdisv20Bd21Ref1016598m.p A0A0Q3FYI0 PAC:33432249 Brachypodium distachyon Bd21 AnntCtrl 146  
Brdisv1Tek-41008088m.p PAC:33506286 Brachypodium distachyon Tek-4 88  
Brdisv1ABR9_r1014769m.p A0A0Q3FYI0 PAC:33538064 Brachypodium distachyon ABR9 146  
Brdisv1BdTR13a1016310m.p A0A0Q3FYI0 PAC:33578431 Brachypodium distachyon BdTR13a 146  
Brdisv1pangenome1029866m.p A0A0Q3FYI0 PAC:33618504 Brachypodium distachyon Pangenome 146  
Brdisv1ABR6_r1015763m.p A0A0Q3FYI0 PAC:33685528 Brachypodium distachyon ABR6 146  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8336709
            19077037