Protein Domain : IPR001275

Type:  Domain Name:  DM DNA-binding domain
Description:  This domain was first discovered in the doublesex proteins of Drosophila melanogasterand is also seen in proteins from Caenorhabditis elegans[]. In D. melanogaster the doublesex gene controls somatic sexual differentiation by producing alternatively spliced mRNAs encoding related sex-specific polypeptides []. These proteins are believed to function as transcription factors on downstream sex-determination genes, especially on neuroblast differentiation and yolk protein genes transcription [, ]. The DM domain binds DNA as a dimer, allowing the recognition of pseudopalindromic sequences [, , ]. The NMR analysis of the DSX DM domain [] revealed a novel zinc module containing 'intertwined' CCHC and HCCC zinc-binding sites. The recognition of the DNA requires the carboxy-terminal basic tail which contacts the minor groove of the target sequence. Short Name:  DM_DNA-bd

0 Child Features

0 Contains

6 Cross Referencess

Identifier
PF00751
PS40000
PS50809
SM00301
G3DSA:4.10.1040.10
SSF82927

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0043565 IPR001275
GO:0006355 IPR001275

2 Ontology Annotations

GO Term Gene Name
GO:0043565 IPR001275
GO:0006355 IPR001275

0 Parent Features

185 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_34.113 PAC:16417842 Carica papaya 70  
Thhalv10002196m V4M2S8 PAC:20200529 Eutrema salsugineum 68  
Thhalv10021922m V4LD77 PAC:20182398 Eutrema salsugineum 68  
Thhalv10012262m V4MFS0 PAC:20185052 Eutrema salsugineum 68  
Ciclev10010786m V4URU6 PAC:20793013 Citrus clementina 68  
Lus10007426 PAC:23180213 Linum usitatissimum 507  
Potri.013G145100.1 A0A2K1Y5N8 PAC:26995804 Populus trichocarpa 68  
Gorai.002G074500.1 A0A0D2NJF9 PAC:26792056 Gossypium raimondii 68  
Thecc1EG002597t1 A0A061DMS2 PAC:27435008 Theobroma cacao 69  
Migut.I00399.1.p PAC:28931408 Mimulus guttatus 605  
Migut.M00867.1.p PAC:28949813 Mimulus guttatus 69  
Cagra.0846s0002.1.p PAC:28905376 Capsella grandiflora 93  
Glyma.08G174100.3.p A0A0R0INE4 PAC:30540818 Glycine max 924  
Glyma.08G174100.1.p A0A0R0INL6 PAC:30540816 Glycine max 939  
Glyma.08G174100.2.p A0A0R0INE4 PAC:30540817 Glycine max 924  
Glyma.13G300400.1.p K7M2R6 PAC:30502820 Glycine max 126  
Glyma.15G253100.1.p I1MJ44 PAC:30496568 Glycine max 942  
Bostr.26527s0051.1.p PAC:30654049 Boechera stricta 100  
Medtr2g090110.1 I3S7T0 PAC:31064310 Medicago truncatula 69  
SapurV1A.0048s0530.1.p PAC:31454294 Salix purpurea 68  
SapurV1A.1127s0060.1.p PAC:31407866 Salix purpurea 58  
SapurV1A.0746s0090.1.p PAC:31439351 Salix purpurea 68  
SapurV1A.1187s0020.1.p PAC:31440176 Salix purpurea 68  
evm_27.model.AmTr_v1.0_scaffold00012.51 W1PIE4 PAC:31553114 Amborella trichopoda 795  
evm_27.model.AmTr_v1.0_scaffold00067.100 U5D9C5 PAC:31561536 Amborella trichopoda 82  
evm_27.model.AmTr_v1.0_scaffold01248.1 W1P0K9 PAC:31554751 Amborella trichopoda 68  
Traes_7DL_A47264459.2 PAC:31746477 Triticum aestivum 65  
Prupe.4G187900.1.p A0A251PQZ8 PAC:32092079 Prunus persica 68  
Prupe.1G250400.1.p M5XMA2 PAC:32119219 Prunus persica 98  
GSMUA_Achr10P28780_001 PAC:32321521 Musa acuminata 958  

6 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8978051
            9490411
            1907913
            3046751
            9927589
            10898790