Protein Domain : IPR011578

Type:  Domain Name:  Restriction endonuclease, FokI, C-terminal/endonuclease I, core
Description:  This entry represents a domain found in FokI and other restriction endonucleases, as well as in bacteriophage endonucleases I (Holliday junction resolvase). FokI recognises the double-stranded DNA sequence 5'-GGATG-3' and cleaves DNA phosphodiester groups 9 base pairs away on this strand and 13 base pairs away on the complementary strand []. Endonuclease I () is a junction-resolving enzyme encoded by Bacteriophage T7, that selectively binds and cleaves four-way Holliday DNA junctions []. The structure of the enzyme shows that it forms a symmetric homodimer arranged in two well-separated domains. Each domain, however, is composed of elements from both subunits, and amino acid side chains from both protomers contribute to the active site []. Short Name:  Restrct_endonuc_C/endonuc_I

1 Child Features

DB identifier Type Name
IPR015334 Domain Restriction endonuclease, type II, FokI, C-terminal

0 Contains

1 Cross References

Identifier
G3DSA:3.40.91.30

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0003677 IPR011578
GO:0004536 IPR011578

2 Ontology Annotations

GO Term Gene Name
GO:0003677 IPR011578
GO:0004536 IPR011578

1 Parent Features

DB identifier Type Name
IPR011335 Domain Restriction endonuclease type II-like

32 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_369.2 PAC:16418540 Carica papaya 381  
Thhalv10027305m V4MMZ1 PAC:20193777 Eutrema salsugineum 143  
58198 C1E4Y2 PAC:27400119 Micromonas sp RCC299 992  
100534 C1E6B2 PAC:27395831 Micromonas sp RCC299 1128  
29520 A4SB84 PAC:27420271 Ostreococcus lucimarinus 313  
Glyma.14G127200.1.p K7M6E3 PAC:30532532 Glycine max 254  
Manes.17G099600.1.p A0A2C9U6M0 PAC:32365698 Manihot esculenta 323  
Pp3c16_10120V3.1.p A0A2K1J7Z4 PAC:32986604 Physcomitrium patens 68  
Aco005939.1 PAC:33034747 Ananas comosus 494  
Aqcoe3G259500.1.p PAC:33097196 Aquilegia coerulea 71  
Anaoc.0014s1045.1.p PAC:37545458 Anacardium occidentale 271  
UNPLg00240.t1 PAC:38245320 Chromochloris zofingiensis 324  
Alyli.0012s0125.1.p PAC:39142763 Alyssum linifolium 344  
Mamar.0019s0026.1.p PAC:39428800 Malcolmia maritima 312  
Lesat.0022s0199.1.p PAC:39449230 Lepidium sativum 319  
Camar.1368s0005.1.p PAC:39630125 Cakile maritima 94  
Camar.1447s0005.1.p PAC:39629474 Cakile maritima 216  
Ca_19033 PAC:40136876 Cicer arietinum 201  
Misin04G245200.1.p PAC:40510378 Miscanthus sinensis 49  
Thint.18G0268300.1.p PAC:40859087 Thinopyrum intermedium 243  
Cocit.J1151.1.p PAC:41067460 Corymbia citriodora 97  
Glyma.14G127200.1.p K7M6E3 PAC:41147938 Glycine max 254  
Manes.17G099600.1.p A0A2C9U6M0 PAC:41836702 Manihot esculenta 323  
arahy.Tifrunner.gnm1.ann1.BQ85TZ.1 PAC:42679531 Arachis hypogaea 114  
Potri.001G399050.1.p PAC:42792128 Populus trichocarpa 80  
VuSuvita2.04G017700.3.p PAC:43165845 Vigna unguiculata Suvita2 400  
VuTZ30.04G017500.3.p PAC:44158650 Vigna unguiculata TZ30 400  
VuTZ30.04G017500.4.p PAC:44158651 Vigna unguiculata TZ30 329  
CiLak.10G147600.1.p PAC:44257453 Carya illinoinensis Lakota 317  
CiEll.10G142000.1.p PAC:44343653 Carya illinoinensis Elliott 295  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12093751
            11135673