Protein Domain : IPR015408

Type:  Domain Name:  Zinc finger, Mcm10/DnaG-type
Description:  Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis(African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This zinc finger domain is found in Mcm10 proteins and DnaG-type primases []. Short Name:  Znf_Mcm10/DnaG

0 Child Features

0 Contains

1 Cross References

Identifier
PF09329

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0006260 IPR015408
GO:0005634 IPR015408

2 Ontology Annotations

GO Term Gene Name
GO:0006260 IPR015408
GO:0005634 IPR015408

0 Parent Features

424 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_37.143 PAC:16418596 Carica papaya 271  
29602.m000211 B9SXU9 PAC:16803532 Ricinus communis 348  
Cucsa.234280.1 PAC:16970373 Cucumis sativus 388  
orange1.1g015213m A0A067FXW9 PAC:18099714 Citrus sinensis 411  
AT2G20980.1 Q5XVE2 PAC:19638265 Arabidopsis thaliana 396  
Thhalv10000193m V4L6N9 PAC:20208678 Eutrema salsugineum 397  
Ciclev10028644m V4SAI6 PAC:20814067 Citrus clementina 384  
Lus10014124 PAC:23156791 Linum usitatissimum 400  
Lus10019785 PAC:23163972 Linum usitatissimum 406  
Lus10005072 PAC:23149002 Linum usitatissimum 448  
Potri.009G134500.1 A0A2K1Z7E0 PAC:26988254 Populus trichocarpa 416  
Gorai.002G197400.2 A0A0D2NQ91 PAC:26791962 Gossypium raimondii 340  
Gorai.002G197400.1 A0A0D2MD34 PAC:26791961 Gossypium raimondii 401  
46891 I0Z1X7 PAC:27387497 Coccomyxa subellipsoidea C-169 1579  
19123 C1MY62 PAC:27339223 Micromonas pusilla CCMP1545 186  
102913 C1EDF5 PAC:27404900 Micromonas sp RCC299 652  
16917 A4S362 PAC:27413832 Ostreococcus lucimarinus 605  
Thecc1EG006631t1 A0A061E064 PAC:27464583 Theobroma cacao 397  
Thecc1EG006631t2 A0A061DZ95 PAC:27464584 Theobroma cacao 372  
Migut.B00085.1.p A0A022RCK3 PAC:28946504 Mimulus guttatus 396  
Araha.6604s0007.1.p PAC:28859685 Arabidopsis halleri 396  
Cagra.2961s0005.1.p PAC:28897465 Capsella grandiflora 396  
Glyma.04G003800.1.p I1JSE1 PAC:30490463 Glycine max 409  
Brara.C02502.1.p A0A398A045 PAC:30619401 Brassica rapa FPsc 397  
Bostr.5022s0144.1.p PAC:30666248 Boechera stricta 396  
Cre07.g351400.t1.2 A0A2K3DLB4 PAC:30774821 Chlamydomonas reinhardtii 1175  
Medtr3g117880.1 G7J8I4 PAC:31055614 Medicago truncatula 412  
SapurV1A.0923s0090.1.p PAC:31398711 Salix purpurea 417  
evm_27.model.AmTr_v1.0_scaffold00113.2 W1NTJ8 PAC:31563146 Amborella trichopoda 405  
Traes_5AL_EC258D4DE.1 PAC:31983079 Triticum aestivum 228  

7 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12665246
            15718139
            17210253
            15963892
            10529348
            11179890
            16704411