Protein Domain : IPR008160

Type:  Repeat Name:  Collagen triple helix repeat
Description:  Members of this family belong to the collagen superfamily [].Collagens are generally extracellular structural proteins involved in formation of connective tissue structure.The sequence is predominantly repeats of the G-X-Y and the polypeptide chains form a triple helix. The first position of the repeat isglycine, the second and third positions can be any residue but are frequently proline and hydroxyproline. Collagensare post-translationally modified by proline hydroxylase to form the hydroxyproline residues. Defectivehydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triplehelical structure. Short Name:  Collagen

0 Child Features

0 Contains

1 Cross References

Identifier
PF01391

1 Found In

DB identifier Type Name
IPR017095 Family Saimiri transformation-associated protein

0 GO Annotation

0 Ontology Annotations

0 Parent Features

83 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_46.135 PAC:16420417 Carica papaya 181  
evm.model.supercontig_46.132 PAC:16420414 Carica papaya 273  
evm.model.supercontig_46.136 PAC:16420418 Carica papaya 181  
40018 I0Z518 PAC:27390445 Coccomyxa subellipsoidea C-169 4971  
62282 I0Z2K5 PAC:27387432 Coccomyxa subellipsoidea C-169 192  
62314 I0Z2N5 PAC:27387274 Coccomyxa subellipsoidea C-169 232  
63648 I0YY25 PAC:27392444 Coccomyxa subellipsoidea C-169 364  
63991 I0YWU9 PAC:27388737 Coccomyxa subellipsoidea C-169 516  
56672 I0YST7 PAC:27391634 Coccomyxa subellipsoidea C-169 2484  
56676 I0YSU1 PAC:27391614 Coccomyxa subellipsoidea C-169 2636  
39380 I0ZAZ3 PAC:27389284 Coccomyxa subellipsoidea C-169 258  
60364 C1EBA7 PAC:27404163 Micromonas sp RCC299 561  
Cre17.g733850.t2.1 A0A2K3CR66 PAC:30781952 Chlamydomonas reinhardtii 383  
Cre17.g733850.t1.2 A0A2K3CR73 PAC:30781951 Chlamydomonas reinhardtii 403  
Mapoly0041s0135.1.p A0A2R6X2F0 PAC:33005086 Marchantia polymorpha 1712  
Dusal.0045s00041.1.p PAC:33191639 Dunaliella salina 99  
Dusal.0661s00007.1.p PAC:33199736 Dunaliella salina 339  
Dusal.1158s00002.1.p PAC:33193579 Dunaliella salina 152  
Brdisv1pangenome1008592m.p PAC:33607011 Brachypodium distachyon Pangenome 213  
Brdisv1Gaz-81026218m.p PAC:33827119 Brachypodium distachyon Gaz-8 303  
Brdisv1Gaz-81035832m.p PAC:33812939 Brachypodium distachyon Gaz-8 202  
Brdisv1BdTR11I1044718m.p PAC:34920174 Brachypodium distachyon BdTR11i 245  
Brdisv1BdTR11I1044632m.p PAC:34919134 Brachypodium distachyon BdTR11i 227  
Brdisv1BdTR2G1044884m.p PAC:35089983 Brachypodium distachyon BdTR2g 172  
Brdisv1Adi-101034884m.p PAC:35733714 Brachypodium distachyon Adi-10 388  
Brdisv1Adi-101034914m.p PAC:35735980 Brachypodium distachyon Adi-10 216  
Pum0150s0008.1.p A0A1X6P9H1 PAC:38012713 Porphyra umbilicalis 493  
Pum0239s0020.1.p A0A1X6P3C3 PAC:38017793 Porphyra umbilicalis 539  
Pum0239s0015.1.p A0A1X6P3M3 PAC:38017815 Porphyra umbilicalis 641  
Pum0048s0027.1.p A0A1X6PIB9 PAC:38014726 Porphyra umbilicalis 262  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8240831