Gene : Kaladp0034s0158 K. fedtschenkoi v1.1
Defline:  (1 of 1) K09839 - violaxanthin de-epoxidase (VDE, NPQ1) Genomic Order:  158
Name:  ? Kaladp0034s0158 Secondary Identifier:  ? PAC:35766228
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Kfedtschenkoi CAROTENOID-PWY Kalanchoe fedtschenkoi pathologic  
Kfedtschenkoi PWY-5945 Kalanchoe fedtschenkoi pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Kaladp0034s0158 0.5kb upstream 0.5kb upstream 3019 true Scaffold_34: 1220150-1223168 Kalanchoe fedtschenkoi
Kaladp0034s0158 0.5kb upstream 0.5kb upstream 500 false Scaffold_34: 1220150-1220649 Kalanchoe fedtschenkoi
Kaladp0034s0158 0.5kb downstream 0.5kb downstream 3019 true Scaffold_34: 1220650-1223668 Kalanchoe fedtschenkoi
Kaladp0034s0158 0.5kb downstream 0.5kb downstream 500 false Scaffold_34: 1223169-1223668 Kalanchoe fedtschenkoi
Kaladp0034s0158 1.0kb upstream 1.0kb upstream 3519 true Scaffold_34: 1219650-1223168 Kalanchoe fedtschenkoi
Kaladp0034s0158 1.0kb upstream 1.0kb upstream 1000 false Scaffold_34: 1219650-1220649 Kalanchoe fedtschenkoi
Kaladp0034s0158 1.0kb downstream 1.0kb downstream 3519 true Scaffold_34: 1220650-1224168 Kalanchoe fedtschenkoi
Kaladp0034s0158 1.0kb downstream 1.0kb downstream 1000 false Scaffold_34: 1223169-1224168 Kalanchoe fedtschenkoi
Kaladp0034s0158 2.0kb upstream 2.0kb upstream 4519 true Scaffold_34: 1218650-1223168 Kalanchoe fedtschenkoi
Kaladp0034s0158 2.0kb upstream 2.0kb upstream 2000 false Scaffold_34: 1218650-1220649 Kalanchoe fedtschenkoi
Kaladp0034s0158 2.0kb downstream 2.0kb downstream 4519 true Scaffold_34: 1220650-1225168 Kalanchoe fedtschenkoi
Kaladp0034s0158 2.0kb downstream 2.0kb downstream 2000 false Scaffold_34: 1223169-1225168 Kalanchoe fedtschenkoi
Kaladp0034s0158 5.0kb upstream 5.0kb upstream 7519 true Scaffold_34: 1215650-1223168 Kalanchoe fedtschenkoi
Kaladp0034s0158 5.0kb upstream 5.0kb upstream 5000 false Scaffold_34: 1215650-1220649 Kalanchoe fedtschenkoi
Kaladp0034s0158 5.0kb downstream 5.0kb downstream 7519 true Scaffold_34: 1220650-1228168 Kalanchoe fedtschenkoi
Kaladp0034s0158 5.0kb downstream 5.0kb downstream 5000 false Scaffold_34: 1223169-1228168 Kalanchoe fedtschenkoi
Kaladp0034s0158 10.0kb upstream 10.0kb upstream 12519 true Scaffold_34: 1210650-1223168 Kalanchoe fedtschenkoi
Kaladp0034s0158 10.0kb upstream 10.0kb upstream 10000 false Scaffold_34: 1210650-1220649 Kalanchoe fedtschenkoi
Kaladp0034s0158 10.0kb downstream 10.0kb downstream 12519 true Scaffold_34: 1220650-1233168 Kalanchoe fedtschenkoi
Kaladp0034s0158 10.0kb downstream 10.0kb downstream 10000 false Scaffold_34: 1223169-1233168 Kalanchoe fedtschenkoi

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123739304 5271 Pentapetalae View MSA
122790516 5272 Eudicot View MSA
122041813 5273 Angiosperm View MSA
121344367 5274 Embryophyte View MSA
123425421 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain