Protein Domain : IPR009067

Type:  Domain Name:  TAFII-230 TBP-binding
Description:  In eukaryotes, the general transcription factor TFIID helps to regulate transcription by RNA polymerase II from class II promoters. TFIID consists of TATA-box-binding proteins (TBP) and TBP-associated factors (TAFIIs), which together mediate both activation and inhibition of transcription. In Drosophila, the N-terminal region of TAFII-230 (the TFIID 230kDa subunit) binds directly to TBP, thereby inhibiting the binding of TBP to the TATA box. The structure of TAFII-230 is comprised of three short helices in an irregular array, which forms the core that occupies the DNA-binding surface of TBP []. Short Name:  TAF_II_230-bd

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PF09247
G3DSA:1.10.1100.10
SSF47055

1 Found In

DB identifier Type Name
IPR011177 Family Transcription initiation factor TFIID subunit 1, animal

0 GO Annotation

0 Ontology Annotations

0 Parent Features

842 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_471.4 PAC:16420707 Carica papaya 117  
29838.m001663 B9S9F7 PAC:16810333 Ricinus communis 1885  
Cucsa.077890.1 A0A0A0KA05 PAC:16956012 Cucumis sativus 1899  
orange1.1g000875m PAC:18135590 Citrus sinensis 1242  
orange1.1g000792m PAC:18135589 Citrus sinensis 1282  
orange1.1g000877m PAC:18135591 Citrus sinensis 1242  
orange1.1g007978m A0A067DKA8 PAC:18135594 Citrus sinensis 582  
orange1.1g008410m A0A067DWL4 PAC:18135596 Citrus sinensis 566  
orange1.1g008409m A0A067DWL4 PAC:18135595 Citrus sinensis 566  
orange1.1g009528m A0A067DPB3 PAC:18135597 Citrus sinensis 532  
AT3G19810.1 Q9LT27 PAC:19664946 Arabidopsis thaliana 321  
AT1G32750.1 Q8LRK9 PAC:19656601 Arabidopsis thaliana 1919  
Thhalv10006532m V4MPH9 PAC:20187129 Eutrema salsugineum 1912  
Ciclev10004161m V4SAV3 PAC:20790228 Citrus clementina 1339  
Ciclev10004125m PAC:20789873 Citrus clementina 1943  
Ciclev10004140m V4S5G8 PAC:20790227 Citrus clementina 1594  
Lus10008585 PAC:23180095 Linum usitatissimum 94  
Potri.017G047600.1 A0A2K1X3C3 PAC:26985435 Populus trichocarpa 1902  
Potri.017G047600.4 PAC:26985439 Populus trichocarpa 1298  
Potri.017G047600.3 PAC:26985438 Populus trichocarpa 1411  
Potri.017G047600.2 PAC:26985436 Populus trichocarpa 1888  
Potri.007G113300.1 A0A2K1ZSV3 PAC:27015830 Populus trichocarpa 1895  
Potri.007G113300.2 PAC:27015832 Populus trichocarpa 1882  
Potri.007G113300.3 B9HED4 PAC:27015831 Populus trichocarpa 1891  
Gorai.011G137400.5 A0A0D2T7N7 PAC:26812242 Gossypium raimondii 1304  
Gorai.011G137400.4 A0A0D2VLX8 PAC:26812241 Gossypium raimondii 1405  
Gorai.011G137400.2 A0A0D2USR3 PAC:26812239 Gossypium raimondii 1408  
Gorai.011G137400.6 A0A0D2RLZ9 PAC:26812243 Gossypium raimondii 1122  
Gorai.011G137400.3 A0A0D2VLX8 PAC:26812240 Gossypium raimondii 1405  
Gorai.011G137400.1 A0A0D2UTN8 PAC:26812238 Gossypium raimondii 1893  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9741622