Protein Domain : IPR015252

Type:  Domain Name:  Breast cancer type 2 susceptibility protein, helical domain
Description:  This entry represents a domain found in BRCA2 proteins. This domain adopts a helical structure, consisting of a four-helix cluster core (alpha 1, alpha 8, alpha 9, alpha 10) and two successive beta-hairpins (beta 1 to beta 4). An approximately 50-amino acid segment that contains four short helices (alpha 2 to alpha 4), meanders around the surface of the core structure. In BRCA2, the alpha 9 and alpha 10 helices pack with BRCA-2_OB1 () through van der Waals contacts involving hydrophobic and aromatic residues, and also through side-chain and backbone hydrogen bonds. This domain binds the 70-amino acid DSS1 (deleted in split-hand/split foot syndrome) protein, which was originally identified as one of three genes that map to a 1.5-Mb locus deleted in an inherited developmental malformation syndrome []. Short Name:  BRCA2_hlx

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF09169
SSF81872

1 Found In

DB identifier Type Name
IPR015525 Family Breast cancer type 2 susceptibility protein

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_5.230 PAC:16421341 Carica papaya 1105  
29820.m001006 B9SL09 PAC:16809665 Ricinus communis 1156  
Cucsa.176700.1 PAC:16966921 Cucumis sativus 1012  
orange1.1g001266m A0A067F7B4 PAC:18131010 Citrus sinensis 1112  
AT4G00020.1 Q7Y1C5 PAC:19647158 Arabidopsis thaliana 1151  
AT4G00020.2 F4JGU5 PAC:19647157 Arabidopsis thaliana 1187  
AT5G01630.1 Q7Y1C4 PAC:19670788 Arabidopsis thaliana 1155  
Thhalv10027627m V4LU44 PAC:20189583 Eutrema salsugineum 1075  
Thhalv10012491m V4LCG1 PAC:20203907 Eutrema salsugineum 1163  
Ciclev10013403m V4S5L3 PAC:20796771 Citrus clementina 1112  
Potri.014G189600.1 PAC:27032255 Populus trichocarpa 1186  
Potri.014G189600.2 A0A2K1XY40 PAC:27032256 Populus trichocarpa 1184  
Gorai.012G119100.2 A0A0D2V4H2 PAC:26825306 Gossypium raimondii 1106  
Gorai.012G119100.1 A0A0D2VYG8 PAC:26825305 Gossypium raimondii 1141  
56086 I0YVH7 PAC:27386015 Coccomyxa subellipsoidea C-169 1623  
62866 C1N0K9 PAC:27340452 Micromonas pusilla CCMP1545 780  
62958 C1FJK2 PAC:27399626 Micromonas sp RCC299 1531  
26389 A4S4F0 PAC:27420555 Ostreococcus lucimarinus 1055  
Thecc1EG021601t2 A0A061EXU2 PAC:27423888 Theobroma cacao 1111  
Thecc1EG021601t3 A0A061EPV5 PAC:27423889 Theobroma cacao 982  
Thecc1EG021601t1 A0A061EQZ2 PAC:27423887 Theobroma cacao 1155  
Thecc1EG021601t4 A0A061EQG1 PAC:27423890 Theobroma cacao 791  
Migut.J00101.1.p PAC:28940735 Mimulus guttatus 1140  
Araha.12977s0003.1.p PAC:28846647 Arabidopsis halleri 747  
Cagra.0255s0039.1.p PAC:28917659 Capsella grandiflora 1154  
Glyma.13G010700.2.p K7LYF2 PAC:30501857 Glycine max 1038  
Glyma.13G010700.1.p I1LXQ3 PAC:30501856 Glycine max 1062  
Brara.E01407.1.p A0A397Z9X6 PAC:30627028 Brassica rapa FPsc 1050  
Brara.C00020.1.p A0A397ZY54 PAC:30618847 Brassica rapa FPsc 1086  
Bostr.6251s0130.1.p PAC:30665667 Boechera stricta 1150  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12228710