Gene : estExt_fgenesh1_pm.C_30097 C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) PTHR10668:SF5 - BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2 Genomic Order:  208
Name:  ? estExt_fgenesh1_pm.C_30097 Secondary Identifier:  ? PAC:27390503
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 CAROTENOID-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-6475 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_fgenesh1_pm.C_30097 0.5kb upstream 0.5kb upstream 6864 true scaffold_3: 1130923-1137786 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1130923-1131422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 0.5kb downstream 0.5kb downstream 6864 true scaffold_3: 1131423-1138286 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1137787-1138286 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 1.0kb upstream 1.0kb upstream 7364 true scaffold_3: 1130423-1137786 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1130423-1131422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 1.0kb downstream 1.0kb downstream 7364 true scaffold_3: 1131423-1138786 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1137787-1138786 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 2.0kb upstream 2.0kb upstream 8364 true scaffold_3: 1129423-1137786 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1129423-1131422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 2.0kb downstream 2.0kb downstream 8364 true scaffold_3: 1131423-1139786 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1137787-1139786 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 5.0kb upstream 5.0kb upstream 11364 true scaffold_3: 1126423-1137786 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1126423-1131422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 5.0kb downstream 5.0kb downstream 11364 true scaffold_3: 1131423-1142786 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1137787-1142786 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 10.0kb upstream 10.0kb upstream 16364 true scaffold_3: 1121423-1137786 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1121423-1131422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 10.0kb downstream 10.0kb downstream 16364 true scaffold_3: 1131423-1147786 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30097 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1137787-1147786 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098366 5260 Chlorophyte View MSA
123425130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier