Gene : estExt_fgenesh1_pm.C_30017 C. subellipsoidea C-169 v2.0
Defline:  (1 of 2) 2.3.3.16 - Citrate synthase (unknown stereospecificity) / Oxaloacetate transacetase Genomic Order:  40
Name:  ? estExt_fgenesh1_pm.C_30017 Secondary Identifier:  ? PAC:27390660
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 GLYOXYLATE-BYPASS Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5464 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-561 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5690 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_fgenesh1_pm.C_30017 0.5kb upstream 0.5kb upstream 7402 true scaffold_3: 247977-255378 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 247977-248476 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 0.5kb downstream 0.5kb downstream 7402 true scaffold_3: 248477-255878 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 255379-255878 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 1.0kb upstream 1.0kb upstream 7902 true scaffold_3: 247477-255378 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 247477-248476 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 1.0kb downstream 1.0kb downstream 7902 true scaffold_3: 248477-256378 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 255379-256378 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 2.0kb upstream 2.0kb upstream 8902 true scaffold_3: 246477-255378 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 246477-248476 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 2.0kb downstream 2.0kb downstream 8902 true scaffold_3: 248477-257378 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 255379-257378 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 5.0kb upstream 5.0kb upstream 11902 true scaffold_3: 243477-255378 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 243477-248476 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 5.0kb downstream 5.0kb downstream 11902 true scaffold_3: 248477-260378 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 255379-260378 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 10.0kb upstream 10.0kb upstream 16902 true scaffold_3: 238477-255378 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 238477-248476 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 10.0kb downstream 10.0kb downstream 16902 true scaffold_3: 248477-265378 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_30017 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 255379-265378 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110607 5260 Chlorophyte View MSA
123424186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier