Gene : estExt_Genemark1.C_50269 C. subellipsoidea C-169 v2.0
Defline:  (1 of 2) 2.1.2.1 - Glycine hydroxymethyltransferase / Threonine aldolase Genomic Order:  265
Name:  ? estExt_Genemark1.C_50269 Secondary Identifier:  ? PAC:27387339
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 GLYSYN-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-2161 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-3841 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 SER-GLYSYN-PWY Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_Genemark1.C_50269 0.5kb upstream 0.5kb upstream 4402 true scaffold_5: 1368732-1373133 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1372634-1373133 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 0.5kb downstream 0.5kb downstream 4402 true scaffold_5: 1368232-1372633 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1368232-1368731 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 1.0kb upstream 1.0kb upstream 4902 true scaffold_5: 1368732-1373633 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1372634-1373633 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 1.0kb downstream 1.0kb downstream 4902 true scaffold_5: 1367732-1372633 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1367732-1368731 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 2.0kb upstream 2.0kb upstream 5902 true scaffold_5: 1368732-1374633 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1372634-1374633 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 2.0kb downstream 2.0kb downstream 5902 true scaffold_5: 1366732-1372633 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1366732-1368731 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 5.0kb upstream 5.0kb upstream 8902 true scaffold_5: 1368732-1377633 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1372634-1377633 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 5.0kb downstream 5.0kb downstream 8902 true scaffold_5: 1363732-1372633 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1363732-1368731 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 10.0kb upstream 10.0kb upstream 13902 true scaffold_5: 1368732-1382633 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1372634-1382633 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 10.0kb downstream 10.0kb downstream 13902 true scaffold_5: 1358732-1372633 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_50269 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1358732-1368731 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110418 5260 Chlorophyte View MSA
123426459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier