Gene : Genemark1.3356_g C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) PF12251 - snRNA-activating protein of 50kDa MW C terminal (zf-SNAP50_C) Genomic Order:  226
Name:  ? Genemark1.3356_g Secondary Identifier:  ? PAC:27391189
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Genemark1.3356_g 0.5kb upstream 0.5kb upstream 2270 true scaffold_6: 1151681-1153950 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1151681-1152180 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 0.5kb downstream 0.5kb downstream 2270 true scaffold_6: 1152181-1154450 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1153951-1154450 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 1.0kb upstream 1.0kb upstream 2770 true scaffold_6: 1151181-1153950 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1151181-1152180 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 1.0kb downstream 1.0kb downstream 2770 true scaffold_6: 1152181-1154950 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1153951-1154950 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 2.0kb upstream 2.0kb upstream 3770 true scaffold_6: 1150181-1153950 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1150181-1152180 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 2.0kb downstream 2.0kb downstream 3770 true scaffold_6: 1152181-1155950 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1153951-1155950 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 5.0kb upstream 5.0kb upstream 6770 true scaffold_6: 1147181-1153950 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1147181-1152180 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 5.0kb downstream 5.0kb downstream 6770 true scaffold_6: 1152181-1158950 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1153951-1158950 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 10.0kb upstream 10.0kb upstream 11770 true scaffold_6: 1142181-1153950 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1142181-1152180 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 10.0kb downstream 10.0kb downstream 11770 true scaffold_6: 1152181-1163950 Coccomyxa subellipsoidea C-169
Genemark1.3356_g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1153951-1163950 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124097114 5260 Chlorophyte Singleton cluster - no MSA
123424819 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier