Gene : fgenesh1_pg_7_num_304 C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) PTHR13789:SF207 - LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC Genomic Order:  418
Name:  ? fgenesh1_pg_7_num_304 Secondary Identifier:  ? PAC:27386677
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 CAROTENOID-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5946 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
fgenesh1_pg_7_num_304 0.5kb upstream 0.5kb upstream 5001 true scaffold_7: 2058378-2063378 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2058378-2058877 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 0.5kb downstream 0.5kb downstream 5001 true scaffold_7: 2058878-2063878 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2063379-2063878 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 1.0kb upstream 1.0kb upstream 5501 true scaffold_7: 2057878-2063378 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2057878-2058877 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 1.0kb downstream 1.0kb downstream 5501 true scaffold_7: 2058878-2064378 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2063379-2064378 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 2.0kb upstream 2.0kb upstream 6501 true scaffold_7: 2056878-2063378 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2056878-2058877 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 2.0kb downstream 2.0kb downstream 6501 true scaffold_7: 2058878-2065378 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2063379-2065378 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 5.0kb upstream 5.0kb upstream 9501 true scaffold_7: 2053878-2063378 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2053878-2058877 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 5.0kb downstream 5.0kb downstream 9501 true scaffold_7: 2058878-2068378 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2063379-2068378 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 10.0kb upstream 10.0kb upstream 14501 true scaffold_7: 2048878-2063378 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2048878-2058877 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 10.0kb downstream 10.0kb downstream 14501 true scaffold_7: 2058878-2073378 Coccomyxa subellipsoidea C-169
fgenesh1_pg_7_num_304 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2063379-2073378 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111202 5260 Chlorophyte View MSA
123424108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier