Gene : fgenesh1_pm_7_num_104 C. subellipsoidea C-169 v2.0
Defline:  (1 of 2) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase Genomic Order:  229
Name:  ? fgenesh1_pm_7_num_104 Secondary Identifier:  ? PAC:27386909
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 TRNA-CHARGING-PWY Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
fgenesh1_pm_7_num_104 0.5kb upstream 0.5kb upstream 3252 true scaffold_7: 1129243-1132494 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1129243-1129742 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 0.5kb downstream 0.5kb downstream 3252 true scaffold_7: 1129743-1132994 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1132495-1132994 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 1.0kb upstream 1.0kb upstream 3752 true scaffold_7: 1128743-1132494 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1128743-1129742 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 1.0kb downstream 1.0kb downstream 3752 true scaffold_7: 1129743-1133494 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1132495-1133494 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 2.0kb upstream 2.0kb upstream 4752 true scaffold_7: 1127743-1132494 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1127743-1129742 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 2.0kb downstream 2.0kb downstream 4752 true scaffold_7: 1129743-1134494 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1132495-1134494 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 5.0kb upstream 5.0kb upstream 7752 true scaffold_7: 1124743-1132494 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1124743-1129742 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 5.0kb downstream 5.0kb downstream 7752 true scaffold_7: 1129743-1137494 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1132495-1137494 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 10.0kb upstream 10.0kb upstream 12752 true scaffold_7: 1119743-1132494 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1119743-1129742 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 10.0kb downstream 10.0kb downstream 12752 true scaffold_7: 1129743-1142494 Coccomyxa subellipsoidea C-169
fgenesh1_pm_7_num_104 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1132495-1142494 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111917 5260 Chlorophyte View MSA
123424484 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier