Gene : fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  132
Name:  ? fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA Secondary Identifier:  ? PAC:27392349
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 BRANCHED-CHAIN-AA-SYN-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 ILEUSYN-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-3001 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 VALSYN-PWY Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 0.5kb upstream 0.5kb upstream 5576 true scaffold_8: 677069-682644 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 682145-682644 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 0.5kb downstream 0.5kb downstream 5576 true scaffold_8: 676569-682144 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 676569-677068 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 1.0kb upstream 1.0kb upstream 6076 true scaffold_8: 677069-683144 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 682145-683144 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 1.0kb downstream 1.0kb downstream 6076 true scaffold_8: 676069-682144 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 676069-677068 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 2.0kb upstream 2.0kb upstream 7076 true scaffold_8: 677069-684144 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 682145-684144 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 2.0kb downstream 2.0kb downstream 7076 true scaffold_8: 675069-682144 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 675069-677068 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 5.0kb upstream 5.0kb upstream 10076 true scaffold_8: 677069-687144 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 682145-687144 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 5.0kb downstream 5.0kb downstream 10076 true scaffold_8: 672069-682144 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 672069-677068 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 10.0kb upstream 10.0kb upstream 15076 true scaffold_8: 677069-692144 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 682145-692144 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 10.0kb downstream 10.0kb downstream 15076 true scaffold_8: 667069-682144 Coccomyxa subellipsoidea C-169
fgenesh1_kg_8_num_36_num_2800_1_CBOZ_CBPA 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 667069-677068 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110036 5260 Chlorophyte View MSA
123428276 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier