Gene : fgenesh1_pg_12_num_34 C. subellipsoidea C-169 v2.0
Defline:  (1 of 2) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  42
Name:  ? fgenesh1_pg_12_num_34 Secondary Identifier:  ? PAC:27391721
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 CAROTENOID-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-6475 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
fgenesh1_pg_12_num_34 0.5kb upstream 0.5kb upstream 3751 true scaffold_12: 218337-222087 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 221588-222087 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 0.5kb downstream 0.5kb downstream 3751 true scaffold_12: 217837-221587 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 217837-218336 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 1.0kb upstream 1.0kb upstream 4251 true scaffold_12: 218337-222587 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 221588-222587 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 1.0kb downstream 1.0kb downstream 4251 true scaffold_12: 217337-221587 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 217337-218336 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 2.0kb upstream 2.0kb upstream 5251 true scaffold_12: 218337-223587 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 221588-223587 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 2.0kb downstream 2.0kb downstream 5251 true scaffold_12: 216337-221587 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 216337-218336 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 5.0kb upstream 5.0kb upstream 8251 true scaffold_12: 218337-226587 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 221588-226587 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 5.0kb downstream 5.0kb downstream 8251 true scaffold_12: 213337-221587 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 213337-218336 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 10.0kb upstream 10.0kb upstream 13251 true scaffold_12: 218337-231587 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 221588-231587 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 10.0kb downstream 10.0kb downstream 13251 true scaffold_12: 208337-221587 Coccomyxa subellipsoidea C-169
fgenesh1_pg_12_num_34 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 208337-218336 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110708 5260 Chlorophyte View MSA
123424120 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier