Gene : fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA C. subellipsoidea C-169 v2.0
Defline:  (1 of 2) PTHR31088:SF6 - MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC Genomic Order:  114
Name:  ? fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA Secondary Identifier:  ? PAC:27388446
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 0.5kb upstream 0.5kb upstream 4137 true scaffold_19: 644393-648529 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 0.5kb upstream 0.5kb upstream 500 false scaffold_19: 648030-648529 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 0.5kb downstream 0.5kb downstream 4137 true scaffold_19: 643893-648029 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 0.5kb downstream 0.5kb downstream 500 false scaffold_19: 643893-644392 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 1.0kb upstream 1.0kb upstream 4637 true scaffold_19: 644393-649029 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 1.0kb upstream 1.0kb upstream 1000 false scaffold_19: 648030-649029 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 1.0kb downstream 1.0kb downstream 4637 true scaffold_19: 643393-648029 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 1.0kb downstream 1.0kb downstream 1000 false scaffold_19: 643393-644392 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 2.0kb upstream 2.0kb upstream 5637 true scaffold_19: 644393-650029 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 2.0kb upstream 2.0kb upstream 2000 false scaffold_19: 648030-650029 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 2.0kb downstream 2.0kb downstream 5637 true scaffold_19: 642393-648029 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 2.0kb downstream 2.0kb downstream 2000 false scaffold_19: 642393-644392 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 5.0kb upstream 5.0kb upstream 8637 true scaffold_19: 644393-653029 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 5.0kb upstream 5.0kb upstream 5000 false scaffold_19: 648030-653029 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 5.0kb downstream 5.0kb downstream 8637 true scaffold_19: 639393-648029 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 5.0kb downstream 5.0kb downstream 5000 false scaffold_19: 639393-644392 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 10.0kb upstream 10.0kb upstream 13637 true scaffold_19: 644393-658029 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 10.0kb upstream 10.0kb upstream 10000 false scaffold_19: 648030-658029 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 10.0kb downstream 10.0kb downstream 13637 true scaffold_19: 634393-648029 Coccomyxa subellipsoidea C-169
fgenesh1_kg_19_num_34_num_3474_1_CBOZ_CBPA 10.0kb downstream 10.0kb downstream 10000 false scaffold_19: 634393-644392 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111094 5260 Chlorophyte View MSA
123427031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier