Gene : estExt_fgenesh1_pg.C_110212 C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 Genomic Order:  287
Name:  ? estExt_fgenesh1_pg.C_110212 Secondary Identifier:  ? PAC:27392159
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_fgenesh1_pg.C_110212 0.5kb upstream 0.5kb upstream 4268 true scaffold_11: 1437155-1441422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 1437155-1437654 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 0.5kb downstream 0.5kb downstream 4268 true scaffold_11: 1437655-1441922 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 1441423-1441922 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 1.0kb upstream 1.0kb upstream 4768 true scaffold_11: 1436655-1441422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 1436655-1437654 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 1.0kb downstream 1.0kb downstream 4768 true scaffold_11: 1437655-1442422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 1441423-1442422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 2.0kb upstream 2.0kb upstream 5768 true scaffold_11: 1435655-1441422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 1435655-1437654 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 2.0kb downstream 2.0kb downstream 5768 true scaffold_11: 1437655-1443422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 1441423-1443422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 5.0kb upstream 5.0kb upstream 8768 true scaffold_11: 1432655-1441422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 1432655-1437654 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 5.0kb downstream 5.0kb downstream 8768 true scaffold_11: 1437655-1446422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 1441423-1446422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 10.0kb upstream 10.0kb upstream 13768 true scaffold_11: 1427655-1441422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 1427655-1437654 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 10.0kb downstream 10.0kb downstream 13768 true scaffold_11: 1437655-1451422 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pg.C_110212 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 1441423-1451422 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109535 5260 Chlorophyte View MSA
123425713 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier