Gene : estExt_Genemark1.C_140060 C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) PTHR11254:SF73 - E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Genomic Order:  63
Name:  ? estExt_Genemark1.C_140060 Secondary Identifier:  ? PAC:27387979
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 PWY-7511 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_Genemark1.C_140060 0.5kb upstream 0.5kb upstream 18852 true scaffold_14: 330978-349829 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 349330-349829 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 0.5kb downstream 0.5kb downstream 18852 true scaffold_14: 330478-349329 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 330478-330977 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 1.0kb upstream 1.0kb upstream 19352 true scaffold_14: 330978-350329 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 349330-350329 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 1.0kb downstream 1.0kb downstream 19352 true scaffold_14: 329978-349329 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 329978-330977 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 2.0kb upstream 2.0kb upstream 20352 true scaffold_14: 330978-351329 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 349330-351329 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 2.0kb downstream 2.0kb downstream 20352 true scaffold_14: 328978-349329 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 328978-330977 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 5.0kb upstream 5.0kb upstream 23352 true scaffold_14: 330978-354329 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 349330-354329 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 5.0kb downstream 5.0kb downstream 23352 true scaffold_14: 325978-349329 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 325978-330977 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 10.0kb upstream 10.0kb upstream 28352 true scaffold_14: 330978-359329 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 349330-359329 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 10.0kb downstream 10.0kb downstream 28352 true scaffold_14: 320978-349329 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140060 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 320978-330977 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109838 5260 Chlorophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier