Gene : e_gw1.11.21.1 C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) PTHR11946:SF86 - METHIONINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  55
Name:  ? e_gw1.11.21.1 Secondary Identifier:  ? PAC:27391974
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 TRNA-CHARGING-PWY Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
e_gw1.11.21.1 0.5kb upstream 0.5kb upstream 9187 true scaffold_11: 335254-344440 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 335254-335753 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 0.5kb downstream 0.5kb downstream 9187 true scaffold_11: 335754-344940 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 344441-344940 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 1.0kb upstream 1.0kb upstream 9687 true scaffold_11: 334754-344440 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 334754-335753 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 1.0kb downstream 1.0kb downstream 9687 true scaffold_11: 335754-345440 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 344441-345440 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 2.0kb upstream 2.0kb upstream 10687 true scaffold_11: 333754-344440 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 333754-335753 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 2.0kb downstream 2.0kb downstream 10687 true scaffold_11: 335754-346440 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 344441-346440 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 5.0kb upstream 5.0kb upstream 13687 true scaffold_11: 330754-344440 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 330754-335753 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 5.0kb downstream 5.0kb downstream 13687 true scaffold_11: 335754-349440 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 344441-349440 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 10.0kb upstream 10.0kb upstream 18687 true scaffold_11: 325754-344440 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 325754-335753 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 10.0kb downstream 10.0kb downstream 18687 true scaffold_11: 335754-354440 Coccomyxa subellipsoidea C-169
e_gw1.11.21.1 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 344441-354440 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112072 5260 Chlorophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier