Gene : estExt_Genemark1.C_160106 C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) 1.13.11.70 - All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Genomic Order:  105
Name:  ? estExt_Genemark1.C_160106 Secondary Identifier:  ? PAC:27394004
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 PWY-7101 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_Genemark1.C_160106 0.5kb upstream 0.5kb upstream 3979 true scaffold_16: 582699-586677 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 586178-586677 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 0.5kb downstream 0.5kb downstream 3979 true scaffold_16: 582199-586177 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 582199-582698 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 1.0kb upstream 1.0kb upstream 4479 true scaffold_16: 582699-587177 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 586178-587177 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 1.0kb downstream 1.0kb downstream 4479 true scaffold_16: 581699-586177 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 581699-582698 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 2.0kb upstream 2.0kb upstream 5479 true scaffold_16: 582699-588177 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 586178-588177 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 2.0kb downstream 2.0kb downstream 5479 true scaffold_16: 580699-586177 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 580699-582698 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 5.0kb upstream 5.0kb upstream 8479 true scaffold_16: 582699-591177 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 586178-591177 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 5.0kb downstream 5.0kb downstream 8479 true scaffold_16: 577699-586177 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 577699-582698 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 10.0kb upstream 10.0kb upstream 13479 true scaffold_16: 582699-596177 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 586178-596177 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 10.0kb downstream 10.0kb downstream 13479 true scaffold_16: 572699-586177 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_160106 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 572699-582698 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098257 5260 Chlorophyte View MSA
123428919 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier