Gene : estExt_fgenesh1_pm.C_100118 C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) PTHR10920:SF12 - TRNA (CYTIDINE(32)/GUANOSINE(34)-2'-O)-METHYLTRANSFERASE-RELATED Genomic Order:  282
Name:  ? estExt_fgenesh1_pm.C_100118 Secondary Identifier:  ? PAC:27385940
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 PWY-6829 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_fgenesh1_pm.C_100118 0.5kb upstream 0.5kb upstream 2473 true scaffold_10: 1384680-1387152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 1384680-1385179 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 0.5kb downstream 0.5kb downstream 2473 true scaffold_10: 1385180-1387652 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 1387153-1387652 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 1.0kb upstream 1.0kb upstream 2973 true scaffold_10: 1384180-1387152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 1384180-1385179 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 1.0kb downstream 1.0kb downstream 2973 true scaffold_10: 1385180-1388152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 1387153-1388152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 2.0kb upstream 2.0kb upstream 3973 true scaffold_10: 1383180-1387152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 1383180-1385179 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 2.0kb downstream 2.0kb downstream 3973 true scaffold_10: 1385180-1389152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 1387153-1389152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 5.0kb upstream 5.0kb upstream 6973 true scaffold_10: 1380180-1387152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 1380180-1385179 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 5.0kb downstream 5.0kb downstream 6973 true scaffold_10: 1385180-1392152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 1387153-1392152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 10.0kb upstream 10.0kb upstream 11973 true scaffold_10: 1375180-1387152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 1375180-1385179 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 10.0kb downstream 10.0kb downstream 11973 true scaffold_10: 1385180-1397152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_100118 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 1387153-1397152 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109263 5260 Chlorophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier