Gene : Genemark1.7210_g C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) PF00106//PF00109//PF00550//PF00698//PF02801//PF11790//PF13602//PF14765//PF16197 - short chain dehydrogenase (adh_short) // Beta-ketoacyl synthase, N-terminal domain (ketoacyl-synt) // Phosphopantetheine attachment site (PP-binding) // Acyl transferase domain (Acyl_transf_1) // Beta-ketoacyl synthase, C-terminal domain (Ketoacyl-synt_C) // Glycosyl hydrolase catalytic core (Glyco_hydro_cc) // Zinc-binding dehydrogenase (ADH_zinc_N_2) // Polyketide synthase dehydratase (PS-DH) // Ketoacyl-synt Genomic Order:  127
Name:  ? Genemark1.7210_g Secondary Identifier:  ? PAC:27394583
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Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 FASYN-ELONG-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-4381 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5142 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5147 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5156 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5366 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5971 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5973 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5989 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-6282 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-7388 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-7663 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Genemark1.7210_g 0.5kb upstream 0.5kb upstream 39336 true scaffold_17: 862758-902093 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 0.5kb upstream 0.5kb upstream 500 false scaffold_17: 862758-863257 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 0.5kb downstream 0.5kb downstream 39336 true scaffold_17: 863258-902593 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 0.5kb downstream 0.5kb downstream 500 false scaffold_17: 902094-902593 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 1.0kb upstream 1.0kb upstream 39836 true scaffold_17: 862258-902093 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 1.0kb upstream 1.0kb upstream 1000 false scaffold_17: 862258-863257 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 1.0kb downstream 1.0kb downstream 39836 true scaffold_17: 863258-903093 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 1.0kb downstream 1.0kb downstream 1000 false scaffold_17: 902094-903093 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 2.0kb upstream 2.0kb upstream 40836 true scaffold_17: 861258-902093 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 2.0kb upstream 2.0kb upstream 2000 false scaffold_17: 861258-863257 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 2.0kb downstream 2.0kb downstream 40836 true scaffold_17: 863258-904093 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 2.0kb downstream 2.0kb downstream 2000 false scaffold_17: 902094-904093 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 5.0kb upstream 5.0kb upstream 43836 true scaffold_17: 858258-902093 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 5.0kb upstream 5.0kb upstream 5000 false scaffold_17: 858258-863257 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 5.0kb downstream 5.0kb downstream 43836 true scaffold_17: 863258-907093 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 5.0kb downstream 5.0kb downstream 5000 false scaffold_17: 902094-907093 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 10.0kb upstream 10.0kb upstream 48836 true scaffold_17: 853258-902093 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 10.0kb upstream 10.0kb upstream 10000 false scaffold_17: 853258-863257 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 10.0kb downstream 10.0kb downstream 48836 true scaffold_17: 863258-912093 Coccomyxa subellipsoidea C-169
Genemark1.7210_g 10.0kb downstream 10.0kb downstream 10000 false scaffold_17: 902094-912093 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124097672 5260 Chlorophyte View MSA
123413853 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier