Gene : estExt_fgenesh1_pm.C_10027 C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) PTHR11538:SF41 - PHENYLALANINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  83
Name:  ? estExt_fgenesh1_pm.C_10027 Secondary Identifier:  ? PAC:27388998
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 TRNA-CHARGING-PWY Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_fgenesh1_pm.C_10027 0.5kb upstream 0.5kb upstream 3395 true scaffold_1: 417086-420480 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 419981-420480 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 0.5kb downstream 0.5kb downstream 3395 true scaffold_1: 416586-419980 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 416586-417085 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 1.0kb upstream 1.0kb upstream 3895 true scaffold_1: 417086-420980 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 419981-420980 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 1.0kb downstream 1.0kb downstream 3895 true scaffold_1: 416086-419980 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 416086-417085 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 2.0kb upstream 2.0kb upstream 4895 true scaffold_1: 417086-421980 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 419981-421980 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 2.0kb downstream 2.0kb downstream 4895 true scaffold_1: 415086-419980 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 415086-417085 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 5.0kb upstream 5.0kb upstream 7895 true scaffold_1: 417086-424980 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 419981-424980 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 5.0kb downstream 5.0kb downstream 7895 true scaffold_1: 412086-419980 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 412086-417085 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 10.0kb upstream 10.0kb upstream 12895 true scaffold_1: 417086-429980 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 419981-429980 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 10.0kb downstream 10.0kb downstream 12895 true scaffold_1: 407086-419980 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10027 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 407086-417085 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109273 5260 Chlorophyte View MSA
123424081 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier