Gene : fgenesh1_pm_1_num_3 C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Genomic Order:  5
Name:  ? fgenesh1_pm_1_num_3 Secondary Identifier:  ? PAC:27389343
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 PWY-1269 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
fgenesh1_pm_1_num_3 0.5kb upstream 0.5kb upstream 1972 true scaffold_1: 21893-23864 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 23365-23864 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 0.5kb downstream 0.5kb downstream 1972 true scaffold_1: 21393-23364 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 21393-21892 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 1.0kb upstream 1.0kb upstream 2472 true scaffold_1: 21893-24364 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 23365-24364 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 1.0kb downstream 1.0kb downstream 2472 true scaffold_1: 20893-23364 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 20893-21892 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 2.0kb upstream 2.0kb upstream 3472 true scaffold_1: 21893-25364 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 23365-25364 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 2.0kb downstream 2.0kb downstream 3472 true scaffold_1: 19893-23364 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 19893-21892 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 5.0kb upstream 5.0kb upstream 6472 true scaffold_1: 21893-28364 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 23365-28364 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 5.0kb downstream 5.0kb downstream 6472 true scaffold_1: 16893-23364 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 16893-21892 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 10.0kb upstream 10.0kb upstream 11472 true scaffold_1: 21893-33364 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 23365-33364 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 10.0kb downstream 10.0kb downstream 11472 true scaffold_1: 11893-23364 Coccomyxa subellipsoidea C-169
fgenesh1_pm_1_num_3 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11893-21892 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112352 5260 Chlorophyte View MSA
123424720 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier