Gene : estExt_fgenesh1_pm.C_10036 C. subellipsoidea C-169 v2.0
Defline:  (1 of 2) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  110
Name:  ? estExt_fgenesh1_pm.C_10036 Secondary Identifier:  ? PAC:27389092
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 CAROTENOID-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-6475 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_fgenesh1_pm.C_10036 0.5kb upstream 0.5kb upstream 3902 true scaffold_1: 571229-575130 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 571229-571728 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 0.5kb downstream 0.5kb downstream 3902 true scaffold_1: 571729-575630 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 575131-575630 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 1.0kb upstream 1.0kb upstream 4402 true scaffold_1: 570729-575130 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 570729-571728 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 1.0kb downstream 1.0kb downstream 4402 true scaffold_1: 571729-576130 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 575131-576130 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 2.0kb upstream 2.0kb upstream 5402 true scaffold_1: 569729-575130 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 569729-571728 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 2.0kb downstream 2.0kb downstream 5402 true scaffold_1: 571729-577130 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 575131-577130 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 5.0kb upstream 5.0kb upstream 8402 true scaffold_1: 566729-575130 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 566729-571728 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 5.0kb downstream 5.0kb downstream 8402 true scaffold_1: 571729-580130 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 575131-580130 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 10.0kb upstream 10.0kb upstream 13402 true scaffold_1: 561729-575130 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 561729-571728 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 10.0kb downstream 10.0kb downstream 13402 true scaffold_1: 571729-585130 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_10036 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 575131-585130 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112788 5260 Chlorophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier