Gene : estExt_fgenesh1_pm.C_160023 C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) PTHR11632//PTHR11632:SF54 - SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT Genomic Order:  48
Name:  ? estExt_fgenesh1_pm.C_160023 Secondary Identifier:  ? PAC:27394077
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 PWY-3781 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-4302 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5464 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-561 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5690 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-7279 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_fgenesh1_pm.C_160023 0.5kb upstream 0.5kb upstream 7012 true scaffold_16: 259153-266164 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 265665-266164 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 0.5kb downstream 0.5kb downstream 7012 true scaffold_16: 258653-265664 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 258653-259152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 1.0kb upstream 1.0kb upstream 7512 true scaffold_16: 259153-266664 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 265665-266664 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 1.0kb downstream 1.0kb downstream 7512 true scaffold_16: 258153-265664 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 258153-259152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 2.0kb upstream 2.0kb upstream 8512 true scaffold_16: 259153-267664 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 265665-267664 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 2.0kb downstream 2.0kb downstream 8512 true scaffold_16: 257153-265664 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 257153-259152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 5.0kb upstream 5.0kb upstream 11512 true scaffold_16: 259153-270664 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 265665-270664 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 5.0kb downstream 5.0kb downstream 11512 true scaffold_16: 254153-265664 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 254153-259152 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 10.0kb upstream 10.0kb upstream 16512 true scaffold_16: 259153-275664 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 265665-275664 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 10.0kb downstream 10.0kb downstream 16512 true scaffold_16: 249153-265664 Coccomyxa subellipsoidea C-169
estExt_fgenesh1_pm.C_160023 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 249153-259152 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109616 5260 Chlorophyte View MSA
123424943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier