Gene : AL1G34780 A. lyrata v2.1

Defline:  (1 of 1) PTHR20275:SF6 - NADH KINASE POS5, MITOCHONDRIAL Genomic Order:  2344
Name:  ? AL1G34780 Secondary Identifier:  ? PAC:35930433

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5083 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G34780 0.5kb upstream 0.5kb upstream 5076   true scaffold_1: 9366510-9371585 Arabidopsis lyrata
AL1G34780 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 9366510-9367009 Arabidopsis lyrata
AL1G34780 0.5kb downstream 0.5kb downstream 5076   true scaffold_1: 9367010-9372085 Arabidopsis lyrata
AL1G34780 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 9371586-9372085 Arabidopsis lyrata
AL1G34780 1.0kb upstream 1.0kb upstream 5576   true scaffold_1: 9366010-9371585 Arabidopsis lyrata
AL1G34780 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 9366010-9367009 Arabidopsis lyrata
AL1G34780 1.0kb downstream 1.0kb downstream 5576   true scaffold_1: 9367010-9372585 Arabidopsis lyrata
AL1G34780 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 9371586-9372585 Arabidopsis lyrata
AL1G34780 2.0kb upstream 2.0kb upstream 6576   true scaffold_1: 9365010-9371585 Arabidopsis lyrata
AL1G34780 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 9365010-9367009 Arabidopsis lyrata
AL1G34780 2.0kb downstream 2.0kb downstream 6576   true scaffold_1: 9367010-9373585 Arabidopsis lyrata
AL1G34780 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 9371586-9373585 Arabidopsis lyrata
AL1G34780 5.0kb upstream 5.0kb upstream 9576   true scaffold_1: 9362010-9371585 Arabidopsis lyrata
AL1G34780 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 9362010-9367009 Arabidopsis lyrata
AL1G34780 5.0kb downstream 5.0kb downstream 9576   true scaffold_1: 9367010-9376585 Arabidopsis lyrata
AL1G34780 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 9371586-9376585 Arabidopsis lyrata
AL1G34780 10.0kb upstream 10.0kb upstream 14576   true scaffold_1: 9357010-9371585 Arabidopsis lyrata
AL1G34780 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 9357010-9367009 Arabidopsis lyrata
AL1G34780 10.0kb downstream 10.0kb downstream 14576   true scaffold_1: 9367010-9381585 Arabidopsis lyrata
AL1G34780 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 9371586-9381585 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366031 5261 Brassicaceae View MSA
123835943 5264 Brassicales-Malvales View MSA
124340798 5266 SBM View MSA
124251776 5268 Malvidae View MSA
124068883 5270 Rosid View MSA
123747972 5271 Pentapetalae View MSA
122793469 5272 Eudicot View MSA
122042984 5273 Angiosperm View MSA
121349739 5274 Embryophyte View MSA
123425454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain