Gene : AL1G35100 A. lyrata v2.1

Defline:  (1 of 1) PTHR22811:SF58 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 10 Genomic Order:  2376
Name:  ? AL1G35100 Secondary Identifier:  ? PAC:35932287

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G35100 0.5kb upstream 0.5kb upstream 2154   true scaffold_1: 9484012-9486165 Arabidopsis lyrata
AL1G35100 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 9485666-9486165 Arabidopsis lyrata
AL1G35100 0.5kb downstream 0.5kb downstream 2154   true scaffold_1: 9483512-9485665 Arabidopsis lyrata
AL1G35100 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 9483512-9484011 Arabidopsis lyrata
AL1G35100 1.0kb upstream 1.0kb upstream 2654   true scaffold_1: 9484012-9486665 Arabidopsis lyrata
AL1G35100 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 9485666-9486665 Arabidopsis lyrata
AL1G35100 1.0kb downstream 1.0kb downstream 2654   true scaffold_1: 9483012-9485665 Arabidopsis lyrata
AL1G35100 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 9483012-9484011 Arabidopsis lyrata
AL1G35100 2.0kb upstream 2.0kb upstream 3654   true scaffold_1: 9484012-9487665 Arabidopsis lyrata
AL1G35100 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 9485666-9487665 Arabidopsis lyrata
AL1G35100 2.0kb downstream 2.0kb downstream 3654   true scaffold_1: 9482012-9485665 Arabidopsis lyrata
AL1G35100 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 9482012-9484011 Arabidopsis lyrata
AL1G35100 5.0kb upstream 5.0kb upstream 6654   true scaffold_1: 9484012-9490665 Arabidopsis lyrata
AL1G35100 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 9485666-9490665 Arabidopsis lyrata
AL1G35100 5.0kb downstream 5.0kb downstream 6654   true scaffold_1: 9479012-9485665 Arabidopsis lyrata
AL1G35100 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 9479012-9484011 Arabidopsis lyrata
AL1G35100 10.0kb upstream 10.0kb upstream 11654   true scaffold_1: 9484012-9495665 Arabidopsis lyrata
AL1G35100 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 9485666-9495665 Arabidopsis lyrata
AL1G35100 10.0kb downstream 10.0kb downstream 11654   true scaffold_1: 9474012-9485665 Arabidopsis lyrata
AL1G35100 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 9474012-9484011 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366684 5261 Brassicaceae View MSA
123827630 5264 Brassicales-Malvales View MSA
124321475 5266 SBM View MSA
124239138 5268 Malvidae View MSA
124065325 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain