Gene : AL1G34880 A. lyrata v2.1

Defline:  (1 of 1) K03660 - N-glycosylase/DNA lyase (OGG1) Genomic Order:  2354
Name:  ? AL1G34880 Secondary Identifier:  ? PAC:35934818

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G34880 0.5kb upstream 0.5kb upstream 2351   true scaffold_1: 9409660-9412010 Arabidopsis lyrata
AL1G34880 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 9409660-9410159 Arabidopsis lyrata
AL1G34880 0.5kb downstream 0.5kb downstream 2351   true scaffold_1: 9410160-9412510 Arabidopsis lyrata
AL1G34880 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 9412011-9412510 Arabidopsis lyrata
AL1G34880 1.0kb upstream 1.0kb upstream 2851   true scaffold_1: 9409160-9412010 Arabidopsis lyrata
AL1G34880 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 9409160-9410159 Arabidopsis lyrata
AL1G34880 1.0kb downstream 1.0kb downstream 2851   true scaffold_1: 9410160-9413010 Arabidopsis lyrata
AL1G34880 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 9412011-9413010 Arabidopsis lyrata
AL1G34880 2.0kb upstream 2.0kb upstream 3851   true scaffold_1: 9408160-9412010 Arabidopsis lyrata
AL1G34880 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 9408160-9410159 Arabidopsis lyrata
AL1G34880 2.0kb downstream 2.0kb downstream 3851   true scaffold_1: 9410160-9414010 Arabidopsis lyrata
AL1G34880 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 9412011-9414010 Arabidopsis lyrata
AL1G34880 5.0kb upstream 5.0kb upstream 6851   true scaffold_1: 9405160-9412010 Arabidopsis lyrata
AL1G34880 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 9405160-9410159 Arabidopsis lyrata
AL1G34880 5.0kb downstream 5.0kb downstream 6851   true scaffold_1: 9410160-9417010 Arabidopsis lyrata
AL1G34880 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 9412011-9417010 Arabidopsis lyrata
AL1G34880 10.0kb upstream 10.0kb upstream 11851   true scaffold_1: 9400160-9412010 Arabidopsis lyrata
AL1G34880 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 9400160-9410159 Arabidopsis lyrata
AL1G34880 10.0kb downstream 10.0kb downstream 11851   true scaffold_1: 9410160-9422010 Arabidopsis lyrata
AL1G34880 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 9412011-9422010 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371554 5261 Brassicaceae View MSA
123831597 5264 Brassicales-Malvales View MSA
124339045 5266 SBM View MSA
124242829 5268 Malvidae View MSA
124067306 5270 Rosid View MSA
123738201 5271 Pentapetalae View MSA
122792790 5272 Eudicot View MSA
122046442 5273 Angiosperm View MSA
121344747 5274 Embryophyte View MSA
123428453 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain