Gene : AL1G33920 A. lyrata v2.1

Defline:  (1 of 2) PTHR31100:SF5 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 29-RELATED Genomic Order:  2266
Name:  ? AL1G33920 Secondary Identifier:  ? PAC:35934136

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G33920 0.5kb upstream 0.5kb upstream 2238   true scaffold_1: 8953153-8955390 Arabidopsis lyrata
AL1G33920 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 8953153-8953652 Arabidopsis lyrata
AL1G33920 0.5kb downstream 0.5kb downstream 2238   true scaffold_1: 8953653-8955890 Arabidopsis lyrata
AL1G33920 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 8955391-8955890 Arabidopsis lyrata
AL1G33920 1.0kb upstream 1.0kb upstream 2738   true scaffold_1: 8952653-8955390 Arabidopsis lyrata
AL1G33920 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 8952653-8953652 Arabidopsis lyrata
AL1G33920 1.0kb downstream 1.0kb downstream 2738   true scaffold_1: 8953653-8956390 Arabidopsis lyrata
AL1G33920 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 8955391-8956390 Arabidopsis lyrata
AL1G33920 2.0kb upstream 2.0kb upstream 3738   true scaffold_1: 8951653-8955390 Arabidopsis lyrata
AL1G33920 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 8951653-8953652 Arabidopsis lyrata
AL1G33920 2.0kb downstream 2.0kb downstream 3738   true scaffold_1: 8953653-8957390 Arabidopsis lyrata
AL1G33920 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 8955391-8957390 Arabidopsis lyrata
AL1G33920 5.0kb upstream 5.0kb upstream 6738   true scaffold_1: 8948653-8955390 Arabidopsis lyrata
AL1G33920 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 8948653-8953652 Arabidopsis lyrata
AL1G33920 5.0kb downstream 5.0kb downstream 6738   true scaffold_1: 8953653-8960390 Arabidopsis lyrata
AL1G33920 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 8955391-8960390 Arabidopsis lyrata
AL1G33920 10.0kb upstream 10.0kb upstream 11738   true scaffold_1: 8943653-8955390 Arabidopsis lyrata
AL1G33920 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 8943653-8953652 Arabidopsis lyrata
AL1G33920 10.0kb downstream 10.0kb downstream 11738   true scaffold_1: 8953653-8965390 Arabidopsis lyrata
AL1G33920 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 8955391-8965390 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370774 5261 Brassicaceae View MSA
123839687 5264 Brassicales-Malvales View MSA
124337593 5266 SBM View MSA
124244739 5268 Malvidae View MSA
124072803 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain