Gene : AL1G35960 A. lyrata v2.1

Defline:  (1 of 4) K00121 - S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase (frmA, ADH5, adhC) Genomic Order:  2460
Name:  ? AL1G35960 Secondary Identifier:  ? PAC:35931893

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5486 Arabidopsis lyrata pathologic  
Alyrata PWY-5751 Arabidopsis lyrata pathologic  
Alyrata PWY-6333 Arabidopsis lyrata pathologic  
Alyrata PWY66-21 Arabidopsis lyrata pathologic  
Alyrata PWY66-389 Arabidopsis lyrata pathologic  
Alyrata PWY-6802 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G35960 0.5kb upstream 0.5kb upstream 2724   true scaffold_1: 9867738-9870461 Arabidopsis lyrata
AL1G35960 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 9867738-9868237 Arabidopsis lyrata
AL1G35960 0.5kb downstream 0.5kb downstream 2724   true scaffold_1: 9868238-9870961 Arabidopsis lyrata
AL1G35960 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 9870462-9870961 Arabidopsis lyrata
AL1G35960 1.0kb upstream 1.0kb upstream 3224   true scaffold_1: 9867238-9870461 Arabidopsis lyrata
AL1G35960 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 9867238-9868237 Arabidopsis lyrata
AL1G35960 1.0kb downstream 1.0kb downstream 3224   true scaffold_1: 9868238-9871461 Arabidopsis lyrata
AL1G35960 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 9870462-9871461 Arabidopsis lyrata
AL1G35960 2.0kb upstream 2.0kb upstream 4224   true scaffold_1: 9866238-9870461 Arabidopsis lyrata
AL1G35960 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 9866238-9868237 Arabidopsis lyrata
AL1G35960 2.0kb downstream 2.0kb downstream 4224   true scaffold_1: 9868238-9872461 Arabidopsis lyrata
AL1G35960 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 9870462-9872461 Arabidopsis lyrata
AL1G35960 5.0kb upstream 5.0kb upstream 7224   true scaffold_1: 9863238-9870461 Arabidopsis lyrata
AL1G35960 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 9863238-9868237 Arabidopsis lyrata
AL1G35960 5.0kb downstream 5.0kb downstream 7224   true scaffold_1: 9868238-9875461 Arabidopsis lyrata
AL1G35960 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 9870462-9875461 Arabidopsis lyrata
AL1G35960 10.0kb upstream 10.0kb upstream 12224   true scaffold_1: 9858238-9870461 Arabidopsis lyrata
AL1G35960 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 9858238-9868237 Arabidopsis lyrata
AL1G35960 10.0kb downstream 10.0kb downstream 12224   true scaffold_1: 9868238-9880461 Arabidopsis lyrata
AL1G35960 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 9870462-9880461 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369605 5261 Brassicaceae View MSA
123839438 5264 Brassicales-Malvales View MSA
124339992 5266 SBM View MSA
124250138 5268 Malvidae View MSA
124072751 5270 Rosid View MSA
123744522 5271 Pentapetalae View MSA
122796931 5272 Eudicot View MSA
122046886 5273 Angiosperm View MSA
121310668 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain