Gene : AL1G36500 A. lyrata v2.1

Defline:  (1 of 1) 2.7.1.49 - Hydroxymethylpyrimidine kinase Genomic Order:  2511
Name:  ? AL1G36500 Secondary Identifier:  ? PAC:35932493

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6890 Arabidopsis lyrata pathologic  
Alyrata PWY-6908 Arabidopsis lyrata pathologic  
Alyrata PWY-6910 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G36500 0.5kb upstream 0.5kb upstream 3188   true scaffold_1: 10116738-10119925 Arabidopsis lyrata
AL1G36500 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 10116738-10117237 Arabidopsis lyrata
AL1G36500 0.5kb downstream 0.5kb downstream 3188   true scaffold_1: 10117238-10120425 Arabidopsis lyrata
AL1G36500 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 10119926-10120425 Arabidopsis lyrata
AL1G36500 1.0kb upstream 1.0kb upstream 3688   true scaffold_1: 10116238-10119925 Arabidopsis lyrata
AL1G36500 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 10116238-10117237 Arabidopsis lyrata
AL1G36500 1.0kb downstream 1.0kb downstream 3688   true scaffold_1: 10117238-10120925 Arabidopsis lyrata
AL1G36500 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 10119926-10120925 Arabidopsis lyrata
AL1G36500 2.0kb upstream 2.0kb upstream 4688   true scaffold_1: 10115238-10119925 Arabidopsis lyrata
AL1G36500 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 10115238-10117237 Arabidopsis lyrata
AL1G36500 2.0kb downstream 2.0kb downstream 4688   true scaffold_1: 10117238-10121925 Arabidopsis lyrata
AL1G36500 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 10119926-10121925 Arabidopsis lyrata
AL1G36500 5.0kb upstream 5.0kb upstream 7688   true scaffold_1: 10112238-10119925 Arabidopsis lyrata
AL1G36500 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 10112238-10117237 Arabidopsis lyrata
AL1G36500 5.0kb downstream 5.0kb downstream 7688   true scaffold_1: 10117238-10124925 Arabidopsis lyrata
AL1G36500 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 10119926-10124925 Arabidopsis lyrata
AL1G36500 10.0kb upstream 10.0kb upstream 12688   true scaffold_1: 10107238-10119925 Arabidopsis lyrata
AL1G36500 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 10107238-10117237 Arabidopsis lyrata
AL1G36500 10.0kb downstream 10.0kb downstream 12688   true scaffold_1: 10117238-10129925 Arabidopsis lyrata
AL1G36500 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 10119926-10129925 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361033 5261 Brassicaceae View MSA
123829578 5264 Brassicales-Malvales View MSA
124340765 5266 SBM View MSA
124237684 5268 Malvidae View MSA
124063802 5270 Rosid View MSA
123739977 5271 Pentapetalae View MSA
122792526 5272 Eudicot View MSA
122045389 5273 Angiosperm View MSA
121344045 5274 Embryophyte View MSA
123424693 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain