Gene : AL1G35620 A. lyrata v2.1

Defline:  (1 of 2) K01834 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (PGAM, gpmA) Genomic Order:  2428
Name:  ? AL1G35620 Secondary Identifier:  ? PAC:35933499

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ANAEROFRUCAT-PWY Arabidopsis lyrata pathologic  
Alyrata ANAGLYCOLYSIS-PWY Arabidopsis lyrata pathologic  
Alyrata PWY66-399 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G35620 0.5kb upstream 0.5kb upstream 2664   true scaffold_1: 9734419-9737082 Arabidopsis lyrata
AL1G35620 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 9734419-9734918 Arabidopsis lyrata
AL1G35620 0.5kb downstream 0.5kb downstream 2664   true scaffold_1: 9734919-9737582 Arabidopsis lyrata
AL1G35620 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 9737083-9737582 Arabidopsis lyrata
AL1G35620 1.0kb upstream 1.0kb upstream 3164   true scaffold_1: 9733919-9737082 Arabidopsis lyrata
AL1G35620 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 9733919-9734918 Arabidopsis lyrata
AL1G35620 1.0kb downstream 1.0kb downstream 3164   true scaffold_1: 9734919-9738082 Arabidopsis lyrata
AL1G35620 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 9737083-9738082 Arabidopsis lyrata
AL1G35620 2.0kb upstream 2.0kb upstream 4164   true scaffold_1: 9732919-9737082 Arabidopsis lyrata
AL1G35620 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 9732919-9734918 Arabidopsis lyrata
AL1G35620 2.0kb downstream 2.0kb downstream 4164   true scaffold_1: 9734919-9739082 Arabidopsis lyrata
AL1G35620 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 9737083-9739082 Arabidopsis lyrata
AL1G35620 5.0kb upstream 5.0kb upstream 7164   true scaffold_1: 9729919-9737082 Arabidopsis lyrata
AL1G35620 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 9729919-9734918 Arabidopsis lyrata
AL1G35620 5.0kb downstream 5.0kb downstream 7164   true scaffold_1: 9734919-9742082 Arabidopsis lyrata
AL1G35620 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 9737083-9742082 Arabidopsis lyrata
AL1G35620 10.0kb upstream 10.0kb upstream 12164   true scaffold_1: 9724919-9737082 Arabidopsis lyrata
AL1G35620 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 9724919-9734918 Arabidopsis lyrata
AL1G35620 10.0kb downstream 10.0kb downstream 12164   true scaffold_1: 9734919-9747082 Arabidopsis lyrata
AL1G35620 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 9737083-9747082 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361455 5261 Brassicaceae View MSA
123830000 5264 Brassicales-Malvales View MSA
124350415 5266 SBM View MSA
124251254 5268 Malvidae View MSA
124065528 5270 Rosid View MSA
123752797 5271 Pentapetalae View MSA
122793128 5272 Eudicot View MSA
122042134 5273 Angiosperm View MSA
121349250 5274 Embryophyte View MSA
123428363 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain