Gene : AL1G40290 A. lyrata v2.1

Defline:  (1 of 3) PTHR10891:SF605 - CALCIUM-BINDING PROTEIN CML25-RELATED Genomic Order:  2864
Name:  ? AL1G40290 Secondary Identifier:  ? PAC:35934753

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G40290 0.5kb upstream 0.5kb upstream 1980   true scaffold_1: 11781743-11783722 Arabidopsis lyrata
AL1G40290 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 11781743-11782242 Arabidopsis lyrata
AL1G40290 0.5kb downstream 0.5kb downstream 1980   true scaffold_1: 11782243-11784222 Arabidopsis lyrata
AL1G40290 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 11783723-11784222 Arabidopsis lyrata
AL1G40290 1.0kb upstream 1.0kb upstream 2480   true scaffold_1: 11781243-11783722 Arabidopsis lyrata
AL1G40290 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 11781243-11782242 Arabidopsis lyrata
AL1G40290 1.0kb downstream 1.0kb downstream 2480   true scaffold_1: 11782243-11784722 Arabidopsis lyrata
AL1G40290 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 11783723-11784722 Arabidopsis lyrata
AL1G40290 2.0kb upstream 2.0kb upstream 3480   true scaffold_1: 11780243-11783722 Arabidopsis lyrata
AL1G40290 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 11780243-11782242 Arabidopsis lyrata
AL1G40290 2.0kb downstream 2.0kb downstream 3480   true scaffold_1: 11782243-11785722 Arabidopsis lyrata
AL1G40290 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 11783723-11785722 Arabidopsis lyrata
AL1G40290 5.0kb upstream 5.0kb upstream 6480   true scaffold_1: 11777243-11783722 Arabidopsis lyrata
AL1G40290 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 11777243-11782242 Arabidopsis lyrata
AL1G40290 5.0kb downstream 5.0kb downstream 6480   true scaffold_1: 11782243-11788722 Arabidopsis lyrata
AL1G40290 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 11783723-11788722 Arabidopsis lyrata
AL1G40290 10.0kb upstream 10.0kb upstream 11480   true scaffold_1: 11772243-11783722 Arabidopsis lyrata
AL1G40290 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 11772243-11782242 Arabidopsis lyrata
AL1G40290 10.0kb downstream 10.0kb downstream 11480   true scaffold_1: 11782243-11793722 Arabidopsis lyrata
AL1G40290 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 11783723-11793722 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374449 5261 Brassicaceae View MSA
123836378 5264 Brassicales-Malvales View MSA
124322155 5266 SBM View MSA
124253055 5268 Malvidae View MSA
124050277 5270 Rosid View MSA
123736874 5271 Pentapetalae View MSA
122791196 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain