Gene : AL1G40190 A. lyrata v2.1

Defline:  (1 of 1) 3.5.1.108 - UDP-3-O-acyl-N-acetylglucosamine deacetylase / UDP-3-O-acyl-GlcNAc deacetylase Genomic Order:  2854
Name:  ? AL1G40190 Secondary Identifier:  ? PAC:35931267

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata NAGLIPASYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G40190 0.5kb upstream 0.5kb upstream 2291   true scaffold_1: 11734408-11736698 Arabidopsis lyrata
AL1G40190 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 11736199-11736698 Arabidopsis lyrata
AL1G40190 0.5kb downstream 0.5kb downstream 2291   true scaffold_1: 11733908-11736198 Arabidopsis lyrata
AL1G40190 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 11733908-11734407 Arabidopsis lyrata
AL1G40190 1.0kb upstream 1.0kb upstream 2791   true scaffold_1: 11734408-11737198 Arabidopsis lyrata
AL1G40190 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 11736199-11737198 Arabidopsis lyrata
AL1G40190 1.0kb downstream 1.0kb downstream 2791   true scaffold_1: 11733408-11736198 Arabidopsis lyrata
AL1G40190 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 11733408-11734407 Arabidopsis lyrata
AL1G40190 2.0kb upstream 2.0kb upstream 3791   true scaffold_1: 11734408-11738198 Arabidopsis lyrata
AL1G40190 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 11736199-11738198 Arabidopsis lyrata
AL1G40190 2.0kb downstream 2.0kb downstream 3791   true scaffold_1: 11732408-11736198 Arabidopsis lyrata
AL1G40190 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 11732408-11734407 Arabidopsis lyrata
AL1G40190 5.0kb upstream 5.0kb upstream 6791   true scaffold_1: 11734408-11741198 Arabidopsis lyrata
AL1G40190 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 11736199-11741198 Arabidopsis lyrata
AL1G40190 5.0kb downstream 5.0kb downstream 6791   true scaffold_1: 11729408-11736198 Arabidopsis lyrata
AL1G40190 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 11729408-11734407 Arabidopsis lyrata
AL1G40190 10.0kb upstream 10.0kb upstream 11791   true scaffold_1: 11734408-11746198 Arabidopsis lyrata
AL1G40190 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 11736199-11746198 Arabidopsis lyrata
AL1G40190 10.0kb downstream 10.0kb downstream 11791   true scaffold_1: 11724408-11736198 Arabidopsis lyrata
AL1G40190 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 11724408-11734407 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365511 5261 Brassicaceae View MSA
123830520 5264 Brassicales-Malvales View MSA
124344354 5266 SBM View MSA
124241167 5268 Malvidae View MSA
124073632 5270 Rosid View MSA
123739136 5271 Pentapetalae View MSA
122793269 5272 Eudicot View MSA
122046520 5273 Angiosperm View MSA
121346728 5274 Embryophyte View MSA
123424011 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain