Gene : AL1G39180 A. lyrata v2.1

Defline:  (1 of 1) K09579 - peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [EC:5.2.1.8] (PIN4) Genomic Order:  2757
Name:  ? AL1G39180 Secondary Identifier:  ? PAC:35932702

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G39180 0.5kb upstream 0.5kb upstream 2383   true scaffold_1: 11259028-11261410 Arabidopsis lyrata
AL1G39180 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 11260911-11261410 Arabidopsis lyrata
AL1G39180 0.5kb downstream 0.5kb downstream 2383   true scaffold_1: 11258528-11260910 Arabidopsis lyrata
AL1G39180 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 11258528-11259027 Arabidopsis lyrata
AL1G39180 1.0kb upstream 1.0kb upstream 2883   true scaffold_1: 11259028-11261910 Arabidopsis lyrata
AL1G39180 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 11260911-11261910 Arabidopsis lyrata
AL1G39180 1.0kb downstream 1.0kb downstream 2883   true scaffold_1: 11258028-11260910 Arabidopsis lyrata
AL1G39180 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 11258028-11259027 Arabidopsis lyrata
AL1G39180 2.0kb upstream 2.0kb upstream 3883   true scaffold_1: 11259028-11262910 Arabidopsis lyrata
AL1G39180 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 11260911-11262910 Arabidopsis lyrata
AL1G39180 2.0kb downstream 2.0kb downstream 3883   true scaffold_1: 11257028-11260910 Arabidopsis lyrata
AL1G39180 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 11257028-11259027 Arabidopsis lyrata
AL1G39180 5.0kb upstream 5.0kb upstream 6883   true scaffold_1: 11259028-11265910 Arabidopsis lyrata
AL1G39180 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 11260911-11265910 Arabidopsis lyrata
AL1G39180 5.0kb downstream 5.0kb downstream 6883   true scaffold_1: 11254028-11260910 Arabidopsis lyrata
AL1G39180 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 11254028-11259027 Arabidopsis lyrata
AL1G39180 10.0kb upstream 10.0kb upstream 11883   true scaffold_1: 11259028-11270910 Arabidopsis lyrata
AL1G39180 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 11260911-11270910 Arabidopsis lyrata
AL1G39180 10.0kb downstream 10.0kb downstream 11883   true scaffold_1: 11249028-11260910 Arabidopsis lyrata
AL1G39180 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 11249028-11259027 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369833 5261 Brassicaceae View MSA
123829083 5264 Brassicales-Malvales View MSA
124350161 5266 SBM View MSA
124241294 5268 Malvidae View MSA
124050383 5270 Rosid View MSA
123750072 5271 Pentapetalae View MSA
122789506 5272 Eudicot View MSA
122046490 5273 Angiosperm View MSA
123429014 5275 Viridiplantae View MSA
121345205 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain