Gene : AL1G39160 A. lyrata v2.1

Defline:  (1 of 5) 1.1.1.22 - UDP-glucose 6-dehydrogenase Genomic Order:  2755
Name:  ? AL1G39160 Secondary Identifier:  ? PAC:35934514

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-4821 Arabidopsis lyrata pathologic  
Alyrata PWY-7346 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G39160 0.5kb upstream 0.5kb upstream 2634   true scaffold_1: 11246437-11249070 Arabidopsis lyrata
AL1G39160 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 11248571-11249070 Arabidopsis lyrata
AL1G39160 0.5kb downstream 0.5kb downstream 2634   true scaffold_1: 11245937-11248570 Arabidopsis lyrata
AL1G39160 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 11245937-11246436 Arabidopsis lyrata
AL1G39160 1.0kb upstream 1.0kb upstream 3134   true scaffold_1: 11246437-11249570 Arabidopsis lyrata
AL1G39160 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 11248571-11249570 Arabidopsis lyrata
AL1G39160 1.0kb downstream 1.0kb downstream 3134   true scaffold_1: 11245437-11248570 Arabidopsis lyrata
AL1G39160 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 11245437-11246436 Arabidopsis lyrata
AL1G39160 2.0kb upstream 2.0kb upstream 4134   true scaffold_1: 11246437-11250570 Arabidopsis lyrata
AL1G39160 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 11248571-11250570 Arabidopsis lyrata
AL1G39160 2.0kb downstream 2.0kb downstream 4134   true scaffold_1: 11244437-11248570 Arabidopsis lyrata
AL1G39160 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 11244437-11246436 Arabidopsis lyrata
AL1G39160 5.0kb upstream 5.0kb upstream 7134   true scaffold_1: 11246437-11253570 Arabidopsis lyrata
AL1G39160 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 11248571-11253570 Arabidopsis lyrata
AL1G39160 5.0kb downstream 5.0kb downstream 7134   true scaffold_1: 11241437-11248570 Arabidopsis lyrata
AL1G39160 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 11241437-11246436 Arabidopsis lyrata
AL1G39160 10.0kb upstream 10.0kb upstream 12134   true scaffold_1: 11246437-11258570 Arabidopsis lyrata
AL1G39160 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 11248571-11258570 Arabidopsis lyrata
AL1G39160 10.0kb downstream 10.0kb downstream 12134   true scaffold_1: 11236437-11248570 Arabidopsis lyrata
AL1G39160 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 11236437-11246436 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368515 5261 Brassicaceae View MSA
123799589 5264 Brassicales-Malvales View MSA
124297092 5266 SBM View MSA
124253382 5268 Malvidae View MSA
124072920 5270 Rosid View MSA
123748185 5271 Pentapetalae View MSA
122786809 5272 Eudicot View MSA
122047797 5273 Angiosperm View MSA
121346775 5274 Embryophyte View MSA
123428129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain